Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0631 ATGGTGATGGGTTTGGAAAAGGATCCTCGGGTGTTTTTTGATGTCTCAATTGGTGGGGACCCTGTGGAAAGAATTGTAATACAGCTTTTTGCTGGTGTTGTTCCCAAGACAGCTGAGAATTTTCGGGCACTCTGTACAGGGGAGAAGGGCATTGGGGCATCCACTGCGAAACCTTTGCATTATAAAGGGACAAGTTTTCATCGAATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGCAATGGCACTGGTGGGGAAAGTATATATGGAGGAAAATTTGCAGATGAAAATTTCAAACTATCACATGATGGACCTGGTGTTCTTTCCATGGCTAATAGTGGAGCTAACACAAATGGGTCTCAGTTCTTTATTACCTTTAAGCGCCAACCACATCTTGATGGTAAACACGTTGTTTTTGGGAAAGTTGTCATGGGAATGGACATCCTGAAGAAAATTGAGCTGGTGGGATCTTCTGATGGGAAACCTGTTCAGCCCGTCAAAATTATTGATTGTGGTGAAGTTTCAGAGACAAAAGTCCAGCATGCTGTTGAGAAGGACAAAGGGAAAAAGAGAAAATCAGGGAAATCTGTATCTCCTGATGATGGTTCTGCCAAAAGATCAAGGGGTAGAAGGAAAAAAACTTCAAAAGATACTAAGAGAAGGAAGAAGAGATACTCAACATCAGATAGTGATAGTAGTRGCAGTGACAGTTATTCCTCAGATTCTGAATCAGATTCAGATTYTGAATCAGATCCATCCCATTCTGATTCAAGTTCCTCTAGCTATGGAAAGCATCGGAAGAGGAAGGGGGATAAGCGCAAGCATGAGAAGAAGAGGAGAAAGGGACAAAAGCATAGAAGGCGCCAGCACGCTAGAAGTAGAAGATCAAGACACAAGTCCAAATGGAGTTCAGAGGATTCAAGTGATACAGAAAGTGAAAGTTCTAGTGCTAGTGGCAGTAGTTCTGGCAAGGAAAAGGCTGATCGTCGTGGCTCTAGATCTAAAGCACTTGCTGACAATAAACCAGAAAGGAATTTAGACACAGGAAAGCAATCTTCTAGTCCCCCTATAAAAAGTAAAACTATTTCAGAACAAGGGATGGATACTAAGGCTAGAAGAACTGTGGACAAGGAATCACATGAAGAAGGTGAACTGTCTCCGGAAAATGATGAACTTCTGAATAATGGGCATGATACTCGGGCCAAACTTAGTAAACCTTCTAAGCAACAGACCTATTCAGATGATTCAGATCAGAATAGAGGTGCAAGTCCTGGAAGAGGTCCTGCTGGGAAGTCTGGGGAGCTAAACCAGGGACACARTGTATTGGCTAGTCCTGGTCAAAAAGCATCTGAACCAGCATCYAAAACYCAGGGCTTTTCGAAAAGTCCTTCACCACATGGTATGCCTAAGCGTATAAAAAAAGGACGTGGCTTTACAGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCTGAACGTTCTCCCCSTGCATATCGTTATGGCGATAGAAATATTAGAAGGAACTTTGACAGGTGCCTATATCATTTTGCTAAGCTAGATTCTTTGGAACATGTTGCATATTGTTCTCAGTTTTATGTTATTTTTAGAAACTCAAGCTACAGAAGATATTCTGAGCGCTCCCCTCCAAGACGTTTCCGGAGCCCACCAAGGGGTGGGAACCGTCCAAGATACCAAAATAGAAGAAGTCGAAGTAGGAGCATCTCTCGCAGTCCAGTGCGTGGCCGTTTTAGAGACCATGGTCGCAGCCAGAGTCCAGTACGTAGTCCTAGTCCTGAAGACAGGAGGCCTCCAATAAGTGACAGATTGAAATCCCGACTTGGTCCTCGTAATGATCTACCCTCTCCGGACAAAGGCAGGTCAAGGTCCAAWTCCAGGAGTAACAGATCTTCTAGTTCCAGATCACCTGATGCGACGCCACCAAAACGACGACATGATAAAAGGACATCATCTCGAAGCAGGTCTAGATCAAGCTCAYTGTCTGGACAAAAGGGGTTAGTTTCTTATGGAGATGCAAGTCCTGATTCTGGGGCAACGTAG 2073 0.4375 MVMGLEKDPRVFFDVSIGGDPVERIVIQLFAGVVPKTAENFRALCTGEKGIGASTAKPLHYKGTSFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLSHDGPGVLSMANSGANTNGSQFFITFKRQPHLDGKHVVFGKVVMGMDILKKIELVGSSDGKPVQPVKIIDCGEVSETKVQHAVEKDKGKKRKSGKSVSPDDGSAKRSRGRRKKTSKDTKRRKKRYSTSDSDSSXSDSYSSDSESDSDXESDPSHSDSSSSSYGKHRKRKGDKRKHEKKRRKGQKHRRRQHARSRRSRHKSKWSSEDSSDTESESSSASGSSSGKEKADRRGSRSKALADNKPERNLDTGKQSSSPPIKSKTISEQGMDTKARRTVDKESHEEGELSPENDELLNNGHDTRAKLSKPSKQQTYSDDSDQNRGASPGRGPAGKSGELNQGHXVLASPGQKASEPASKTQGFSKSPSPHGMPKRIKKGRGFTERYAFARRYRTPSPERSPXAYRYGDRNIRRNFDRCLYHFAKLDSLEHVAYCSQFYVIFRNSSYRRYSERSPPRRFRSPPRGGNRPRYQNRRSRSRSISRSPVRGRFRDHGRSQSPVRSPSPEDRRPPISDRLKSRLGPRNDLPSPDKGRSRSXSRSNRSSSSRSPDATPPKRRHDKRTSSRSRSRSSSLSGQKGLVSYGDASPDSGAT* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0631 690 MobiDBLite consensus disorder prediction 408 423 - -
Amo06g0631 690 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 19 175 IPR002130 GO:0000413|GO:0003755
Amo06g0631 690 MobiDBLite consensus disorder prediction 568 582 - -
Amo06g0631 690 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 417 - -
Amo06g0631 690 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 61 78 IPR020892 GO:0003755|GO:0006457
Amo06g0631 690 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 5 417 - -
Amo06g0631 690 MobiDBLite consensus disorder prediction 550 690 - -
Amo06g0631 690 MobiDBLite consensus disorder prediction 182 210 - -
Amo06g0631 690 Gene3D - 3 184 IPR029000 -
Amo06g0631 690 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 136 IPR002130 GO:0000413|GO:0003755
Amo06g0631 690 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 IPR002130 GO:0000413|GO:0003755
Amo06g0631 690 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 29 44 IPR002130 GO:0000413|GO:0003755
Amo06g0631 690 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 124 IPR002130 GO:0000413|GO:0003755
Amo06g0631 690 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 78 IPR002130 GO:0000413|GO:0003755
Amo06g0631 690 MobiDBLite consensus disorder prediction 326 349 - -
Amo06g0631 690 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 12 176 IPR002130 GO:0000413|GO:0003755
Amo06g0631 690 MobiDBLite consensus disorder prediction 368 407 - -
Amo06g0631 690 MobiDBLite consensus disorder prediction 182 485 - -
Amo06g0631 690 MobiDBLite consensus disorder prediction 350 367 - -
Amo06g0631 690 CDD cyclophilin_ABH_like 9 175 - -
Amo06g0631 690 MobiDBLite consensus disorder prediction 268 301 - -
Amo06g0631 690 MobiDBLite consensus disorder prediction 452 466 - -
Amo06g0631 690 SUPERFAMILY Cyclophilin-like 8 177 IPR029000 -
Amo06g0631 690 MobiDBLite consensus disorder prediction 605 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0631 Amo-Chr6 8960946 8966197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0631 27 173 U-box Gene Family AT5G67530 47.651 1.23e-31 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0631 K09566 - qsu:112034236 557.37