Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0617 ATGGGTAATAAGGAGTGTCCAAATGGCGTGGCGATTCCGCCGCCGCAACCGTTTATGAAGTCGTTGAAGTACTCGTTGAAGGAGACGTTCTTCCCGGATGACCCGCTGAGGCAGTTCAAGAACCAGGCGGCGTCAAGGAAGGTGGTGCTGGCACTGCAGTACTTCTTGCCGATATGCGAATGGGGACCACGGTACACCCTCAGGTTCTTGAAATCGGACGTTATTGCCGGCATCACCATCGCCAGTTTGGCCATTCCTCAAGGCATCAGTTATGCTAAGCTCGCCAACCTCCCTCCCATTCTTGGACTTTTGTATAATGATGCTGCAGATTCGAGCTTTATACCGCCATTGATATATGCAATGATGGGAAGCTCAAGGGATTTGGCGGTGGGAACGGTGGCCGTTGGATCACTTCTGATGGCGTCGATGTTGGGTAAGGAGGTTAATTACATCCATAACCCGCAGCTCTATCTACACCTCGCTTTCACTGCTACTTTCTTCGCTGGTGTCTTCCAAGCTTCACTGGGTCTCTTTAGGTTAGGGTTCATAGTGGACTTTCTGTCACATGCAAGCATAGTAGGGTTCATGGGAGGAGCAGCAACAGTGGTATGCCTGCAGCAGCTCAAATCAATTCTGGGATTGGAGCGTTTCACACACCACGCTGATCTTGTCTCCGTCATGCGTTCTGTTTTCTCCCAAACTCACCAATGGAGGTGGGAAAGCGCAGTGTTAGGATGCTGCTTCATATTCTTTCTTCTCATCACTAGATACTTCAGCAAACAAAAACCGAAGCTGTTTTGGGTGTCAGCAATGGCGCCATTGACATCTGTAATTTTGGGAAGTCTCCTTGTCTATTTCACCCACGCCGAGAAGCACGGCGTTCAAGTGATAGGAGAATTGAAGAAGGGGCTAAATCCAGCATCAGTGACAGATTTGATATTTGTGTCGCCTTATATGAACACTGCCATCAAAACTGGCATTATCATCGGCATTATAGCCCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTTAAGAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGCACCATGAACATTGTTGGTTCTTTCACCTCTTGCTACCTTGCAACCGGACCATTTTCGCGTTCGGCTGTAAACTACAATGCTGGGTGCAAGACTGCAGCATCAAACATAGTAATGGCAATAGCAGTGATGTTGACATTGTTATTCCTAACACCATTGTTCCATTACACTCCACTTGTGGTACTATCTGCCATCATAGTATCTGCAATGCTCGGCCTCATAGATTATGAAGCAGCAATCCACCTCTGGAAAATCGACAAATTCGATTTCTTAGTCTGCATTAGTGCATATATCGGTGTCGTCTTTGGCAGTGTCGAAATTGGTTTAGTAATAGCAGTAGCAATATCTGTACTTCGTGTACTGTTATTTGTTGCAAGGCCAAGGACATTTGTTTTAGGTAACATTCCAAATACTGGAGCATATAGAAATGTGGAACAATATCCCAATGCAAAACACATTCCTGGAATGCTAATTCTTGAAATTGATGCACCAATTTACTTTACCAATGCAAGCTATTTAAGAGAGAGGATCACCAGGTGGATTGATGAAGAGGAGGACAGAATCAAAGCTTCAGGACTGAACAGTTTGCAGTATGTGATATTGGATATGACTGCTGTTGCAAACATTGACACAAGTGGAATAAGTATGTTTGAAGAGGTCAAAAAGATTGTTGAGAGAAGAGGACTACAACTGGTTCTGGTGAATCCTGGGAGCGAGGTGATGAAGAAACTGCATAAAGCAAAGTTCCTTGATGAAATAGGGCAGAGGTGGGTGTACCTAACAGTTGAAGAGGCTGTTGCAGCATGCAACTTCATGCTCCATACATATCAACCAAACCCCAAGAAAGATGAATCAGGAGGAGGATGGAACAATGTCTGA 1962 0.4501 MGNKECPNGVAIPPPQPFMKSLKYSLKETFFPDDPLRQFKNQAASRKVVLALQYFLPICEWGPRYTLRFLKSDVIAGITIASLAIPQGISYAKLANLPPILGLLYNDAADSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGKEVNYIHNPQLYLHLAFTATFFAGVFQASLGLFRLGFIVDFLSHASIVGFMGGAATVVCLQQLKSILGLERFTHHADLVSVMRSVFSQTHQWRWESAVLGCCFIFFLLITRYFSKQKPKLFWVSAMAPLTSVILGSLLVYFTHAEKHGVQVIGELKKGLNPASVTDLIFVSPYMNTAIKTGIIIGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLATGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAAIHLWKIDKFDFLVCISAYIGVVFGSVEIGLVIAVAISVLRVLLFVARPRTFVLGNIPNTGAYRNVEQYPNAKHIPGMLILEIDAPIYFTNASYLRERITRWIDEEEDRIKASGLNSLQYVILDMTAVANIDTSGISMFEEVKKIVERRGLQLVLVNPGSEVMKKLHKAKFLDEIGQRWVYLTVEEAVAACNFMLHTYQPNPKKDESGGGWNNV* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0617 653 ProSiteProfiles STAS domain profile. 507 630 IPR002645 -
Amo06g0617 653 Pfam STAS domain 508 626 IPR002645 -
Amo06g0617 653 Pfam Sulfate permease family 70 456 IPR011547 GO:0016021
Amo06g0617 653 Gene3D STAS domain 487 632 IPR036513 -
Amo06g0617 653 PANTHER SLC26A/SULP TRANSPORTER-RELATED 1 650 - -
Amo06g0617 653 PANTHER SULFATE TRANSPORTER 1 650 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo06g0617 653 SUPERFAMILY SpoIIaa-like 509 630 IPR036513 -
Amo06g0617 653 TIGRFAM sulP: sulfate permease 57 626 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo06g0617 653 CDD STAS_SulP_like_sulfate_transporter 508 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0617 Amo-Chr6 8823968 8831274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0617 10 653 Inorganic Solute Cotransporters AT4G02700 67.907 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0617 K17471 - gmx:100791091 1113.6