Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0603 ATGGTGATGGGTTTGGAAAAGGATCCTCGTGTGTTTTTAGATGTCTCAATTGGCGGGGACCCTGTGGAAAGAATTGTAATACAGCTTTTTGCTGGTGTTGTTCCCAAGACAGCTGAGAATTTTCGGGCACTCTGTACAGGGGAGAAGGGCATTGGGGCATCCACTGCGAAACCTTTGCATTATAAAGGGACAAGTTTTCATCGAATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGCAATGGCACTGGTGGAGAAAGTATATATGGAGGAAAATTTGCAGATGAAAATTTCAAACTATCACATGATGGACCTGGTGTTCTTTCCATGGCTAATAGTGGAGCTAACACAAATGGGTCTCAGTTCTTTATTACCTTTAAGCGGCAACCACATCTTGATGGTAAACACGTTGTTTTTGGGAAAGTTGTCATGGGAATGGACATCCTGAAGAAAATTGAGCTGGTGGGATCTTCTGATGGGAAACCTATTCAGCCTGTCAAAATTATTGATTGTGGTGAAGTTTCAGAGACAAAAGTCCAGCATGCTGTTGAGAAGGACAAAGGGAAAAAGAGAAAATCAGGGAAATCTGTATCTCCTGATGATGGTTCTGCCAAAAGATCAAGGGGTAGAAGGAAAAAAACTTCAAAAGATACTAAGAGAAGGAAGAAGAGATACTCAACATCAGATAGTGATAGTAGTGGCAGTGACAGTTATTCCTCAGATTCTGAATCAGATTCAGATTCTGAATCAGATCCATCCCATTCTGATTCAAGTTCCTCTAGCTATGGAAAGCATCGGAAGAGGAAGGGGGATAAGCGCAAGCATGAGAAGAAGAGGAGAAAGGGACAAAAGCATAGAAGGCGCCAGCACACTAGAAGTAGAAGATCAAGACACAAGTCCAAATGGAGTTCAGAGGATTCAAGTGATACAGAAAGTGAAAGTTCTAGTGCTAGTGGCAGTAGTTCTGGCAAGGAAAAGGCTGATCGTCGTGGCTCTAGATCTAAAGCACTTGCTGACAATAAACCACAAAGGAATTTAGACACAGGAAAGCAATCTTCTAGTCCCCCTATAAAAAGTAAAAGTATTTCAGAACAAGGGATGGATACTAAGGCTAGAAGAACTGTGGACAAGGAATCACATGAAGAAGGTGAACTGTCTCCGGAAAATGATGAACTTCTGAATAATGGGCATGATACTCGGGCCAAACTTAGTAAACCTTCTAAGCAACAGACCTATTCAGATGATTCAGATCAGAATAGAGGTGCAAGTCCTGGAAGAGGTCCTGCTGGGAAGTCTGGGGAGCTAAACCAGGGACACAATGTATTGGCTAGTCCTGGTCAAAAAGCATCTGAACCAGCATCTAAAACCCAGGGCTTTTCGAAAAGTCCTTCACCACATGGTATGCCTAAGCGTATAAAAAAAGGACGTGGCTTTACAGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCTGAACGTTCTCCCCCTGCATATCGTTATGGCGATAGAAATATTAGAAGGAACTTTGACAGAAACTCAAGCTACAGAAGATATTCTGAGCGCTCCCCTCCAAGACGTTTCCGGAGCCCACCAAGGGGTGGAAACCGTCCAAGATACCAAAATAGAAGAAGTCGAAGTAGGAGCATCTCTCGCAGTCCAGTGCGTGGCCGTTTTAGAGACCATGGTCGCAGCCAGAGTCCAGTACGTAGTCCTAGTCCTGAAGACAGGAGGCCTCCAATAAGTGACAGATTGAAATCCCGACTTGGTCCTCGTAATGATCTACCCTCTCCGGACAAAGGCAGGTCAAGGTCCAATTCCAGGAGTAACAGATCTTCTAGTTCCAGATCACCTGATGCGACGCCACCAAAACGACGACATGATAAAAGGACATCATCTCGAAGCAGGTCTAGATCAAGCTCATTGTCTGGACAAAAGGGGTTAGTTTCTTATGGAGATGCAAGTCCTGATTCTGGGGCAACGTAG 1998 0.4419 MVMGLEKDPRVFLDVSIGGDPVERIVIQLFAGVVPKTAENFRALCTGEKGIGASTAKPLHYKGTSFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLSHDGPGVLSMANSGANTNGSQFFITFKRQPHLDGKHVVFGKVVMGMDILKKIELVGSSDGKPIQPVKIIDCGEVSETKVQHAVEKDKGKKRKSGKSVSPDDGSAKRSRGRRKKTSKDTKRRKKRYSTSDSDSSGSDSYSSDSESDSDSESDPSHSDSSSSSYGKHRKRKGDKRKHEKKRRKGQKHRRRQHTRSRRSRHKSKWSSEDSSDTESESSSASGSSSGKEKADRRGSRSKALADNKPQRNLDTGKQSSSPPIKSKSISEQGMDTKARRTVDKESHEEGELSPENDELLNNGHDTRAKLSKPSKQQTYSDDSDQNRGASPGRGPAGKSGELNQGHNVLASPGQKASEPASKTQGFSKSPSPHGMPKRIKKGRGFTERYAFARRYRTPSPERSPPAYRYGDRNIRRNFDRNSSYRRYSERSPPRRFRSPPRGGNRPRYQNRRSRSRSISRSPVRGRFRDHGRSQSPVRSPSPEDRRPPISDRLKSRLGPRNDLPSPDKGRSRSNSRSNRSSSSRSPDATPPKRRHDKRTSSRSRSRSSSLSGQKGLVSYGDASPDSGAT* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0603 665 MobiDBLite consensus disorder prediction 408 423 - -
Amo06g0603 665 MobiDBLite consensus disorder prediction 543 557 - -
Amo06g0603 665 MobiDBLite consensus disorder prediction 326 340 - -
Amo06g0603 665 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 175 IPR002130 GO:0000413|GO:0003755
Amo06g0603 665 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 5 414 - -
Amo06g0603 665 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 414 - -
Amo06g0603 665 MobiDBLite consensus disorder prediction 341 367 - -
Amo06g0603 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 136 IPR002130 GO:0000413|GO:0003755
Amo06g0603 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 29 44 IPR002130 GO:0000413|GO:0003755
Amo06g0603 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 78 IPR002130 GO:0000413|GO:0003755
Amo06g0603 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 IPR002130 GO:0000413|GO:0003755
Amo06g0603 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 124 IPR002130 GO:0000413|GO:0003755
Amo06g0603 665 SUPERFAMILY Cyclophilin-like 8 177 IPR029000 -
Amo06g0603 665 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 61 78 IPR020892 GO:0003755|GO:0006457
Amo06g0603 665 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 12 176 IPR002130 GO:0000413|GO:0003755
Amo06g0603 665 MobiDBLite consensus disorder prediction 182 210 - -
Amo06g0603 665 MobiDBLite consensus disorder prediction 504 532 - -
Amo06g0603 665 MobiDBLite consensus disorder prediction 440 466 - -
Amo06g0603 665 MobiDBLite consensus disorder prediction 580 610 - -
Amo06g0603 665 MobiDBLite consensus disorder prediction 182 665 - -
Amo06g0603 665 MobiDBLite consensus disorder prediction 368 407 - -
Amo06g0603 665 CDD cyclophilin_ABH_like 9 175 - -
Amo06g0603 665 Gene3D - 3 184 IPR029000 -
Amo06g0603 665 MobiDBLite consensus disorder prediction 268 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0603 Amo-Chr6 8660163 8665405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0603 27 173 U-box Gene Family AT5G67530 47.651 6.59e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0603 K09566 - gmx:100791082 716.072