Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0595 ATGCACTCTACCATAAAAAGTAATAACTACTTAATGGAATATAATGCAGGATACGTTGTTGGATTTCTGCTGGCTGGAGTGGGTAATGTTGACTTGCGAAGGAAGACAAATTATCTTATTGTAGATTCAAAAACAACTGTGAAACAAATTGAAGATGCATTCAAAGAGTTCACAACTAGGGAAGATATTGCAATTGTGTTAATAAGCCAATATGTTGCAAACATGATAAGATTTTTAGTTGATAGCTACAACAAGCCTGTTCCCGCAATATTGGAGATTCCTTCTAAGGATCATCCTTATGATCCTGCCCATGATTCAGTTCTTTCACGAGTGAAGTACCTCTTCTCTGCGGAATCTGTGGCTTCCGGGAGACGCTAA 378 0.381 MHSTIKSNNYLMEYNAGYVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESVASGRR* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0595 125 Gene3D ATPase, V1 complex, subunit F 15 117 IPR036906 GO:0034220
Amo06g0595 125 SUPERFAMILY AtpF-like 16 94 IPR036906 GO:0034220
Amo06g0595 125 Pfam ATP synthase (F/14-kDa) subunit 19 111 IPR008218 GO:0034220|GO:0046961
Amo06g0595 125 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 13 125 - -
Amo06g0595 125 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 13 125 - -
Amo06g0595 125 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 18 119 IPR005772 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0595 Amo-Chr6 8566934 8569005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0595 19 121 Primary Pumps ATPases(2) AT4G02620 90.291 3.36e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0595 K02151 - tcc:18613243 208.379