Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0525 ATGTATAGTTCTGCTTCTGAGGTTGGGACTCCAATTTGTATTCCTTCTAGAGACTTCATTGACATTGGCCGCATTGCCTCCATTGAAAATAACCACACGCCAGTTGATTATGCAAAGAAAGGGCTGAAAGGAGCTATTAAGATTAAGGACCTTGATATATCAAGGAAGAAAGCAGATCTTGAGGGCCACACAACAAGAGCAGATGGTCTGAGATCAGATTAA 222 0.4144 MYSSASEVGTPICIPSRDFIDIGRIASIENNHTPVDYAKKGLKGAIKIKDLDISRKKADLEGHTTRADGLRSD* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0525 73 Gene3D Translation factors 3 73 - -
Amo06g0525 73 PANTHER PHOTOSYSTEM II PROTEIN D1 6 48 - -
Amo06g0525 73 SUPERFAMILY Translation proteins 8 53 IPR009000 -
Amo06g0525 73 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 6 48 IPR015760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0525 Amo-Chr6 7564036 7567815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0525 8 48 Eukaryotic Initiation Factors Gene Family AT1G76810 82.927 6.81e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0525 K03243 - fve:101298848 72.7886