Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0438 ATGGCTGGAAGTAATGAAGTCAACCTGAATGAGTCTAGGAGTGTTGTTCCGTTGAACACGTGGGTTCTGATATCGAATTTCAAGCTAGCTTACAATCTGTTAAGGAGAGCAGATGGAACTTTCAACAGGGAATTAGCAGAGTTTCTTGACCGCAAAGTTCCATCCAATTCCATCCCCGTCCACGGCGTCTGGTCCTTCGATCATATCGATCAGAGAACCCCCGGCCTATTCTACCGTCTATACCTTCAGGACTCTCATCAACGGAGATGTGCCGGCGCCACCGTAATCCCCGACATGGACAAGCCTCTCAGCACCACCGATATCGTCCCCGTCATAATCTTCTTCCACGGTGGAAGCTTCTCTCATTCCTCCGCCAACAGCGCAATCTACGACACTTTCTGCCGCCGTCTCGTCAATGTAAGCAATTCCGTCGTTGTCTCCGTCAACTACCGCCGTTCACCGGAGCATCGCTTTCCCTGCGCCTACGAGGACGGCTGGACCGCCCTGGAGTGGGTCAGATCGAGAAAATGGCTCCGGAGCGGAAGATCCGAATCGGAATCGGAATCAAAGGTTTATGTATACATGGCGGGTGACAGTTCCGGTGGAAACATAGTTCACCACGTGGCGGTGAGAGCGGCGGAGGAAGGAATCGAGGTTCTCGGTAACATCCTTCTTCATCCACTGTTCGGTGGAGAGAAGAGGACTGAGTCAGAGATAAGGCTTGATGGAAAGTATTTCGTGAAGCTTCAAGATCGAGATTGGTATTGGCGGGCTTTTCTTCCTGAAGGAGAAGATAGAGACCACCCTGCTTGTAACCCGTTTGGGCCAAGGGGTAGGTCCCTTAAGGGCCTAAGCTCATTCCCTAAGACTCTTGTTTGTGTTGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGCTTATGCCAATTCCCTTAGGTCCTTTTCTCACCATGTCAATCTTCTTTACCTTAAGGATGCCACCATTGGTTTCTACTTCTTGCCAAACAATGATCATTTCTCTTCTCTCATGGATCAGATCAACAACTTCGTTAACCCTAACTGTTAA 1065 0.4958 MAGSNEVNLNESRSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPSNSIPVHGVWSFDHIDQRTPGLFYRLYLQDSHQRRCAGATVIPDMDKPLSTTDIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNVSNSVVVSVNYRRSPEHRFPCAYEDGWTALEWVRSRKWLRSGRSESESESKVYVYMAGDSSGGNIVHHVAVRAAEEGIEVLGNILLHPLFGGEKRTESEIRLDGKYFVKLQDRDWYWRAFLPEGEDRDHPACNPFGPRGRSLKGLSSFPKTLVCVAGLDLLQDWQLAYANSLRSFSHHVNLLYLKDATIGFYFLPNNDHFSSLMDQINNFVNPNC* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0438 354 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 112 128 IPR002168 GO:0016787
Amo06g0438 354 PANTHER ARYLACETAMIDE DEACETYLASE 2 351 - -
Amo06g0438 354 Gene3D alpha/beta hydrolase 1 351 IPR029058 -
Amo06g0438 354 PANTHER GIBBERELLIN RECEPTOR GID1C-LIKE PROTEIN 2 351 - -
Amo06g0438 354 Pfam alpha/beta hydrolase fold 112 331 IPR013094 GO:0016787
Amo06g0438 354 SUPERFAMILY alpha/beta-Hydrolases 102 351 IPR029058 -
Amo06g0438 354 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 193 205 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0438 Amo-Chr6 6236751 6238798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0438 1 351 Carbohydrate Esterase AT3G63010 70.370 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0438 K14493 - gmx:100788435 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0060 16 834285 836470 Amo06g0438 06 6236751 6238798 hybridization
Amo06g0438 06 6236751 6238798 Amo12g2712 12 112593170 112596284 PCT
Amo12g2712 12 112593170 112596284 Amo06g0438 06 6236751 6238798 PCT