Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0421 ATGATGGCCTTCTTGGCTAAAGCAATGAAGAACCCTGTGTTTATACAGAAACTCATACAGCACAAGGAGAAGAGGAAGGAGCTTGAGGATGCCATGACCAAGAAGATGAGGAGGCCCATTGAGCAAGGGCCTAGTTGCAGCACCACTACTGTTAAGGTTGAGAATCCACCAGAGTTTGCTGGTTATGCTGGTGGCTTTGGAGCTTCTGAGCTTCAAATTCTGGGTATGGAGATGCAAGGATATGGTAGAGGGAGGCGAGGGAGTACTGAGCATGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGAGGCTTGACAAGGAGCTTGATGATGAAGGCTTCTGGGAAAAGCTGTTCAGTGAGAGTTTTGAGGGTGATTTGGACATTTCTAAAGATGAAGAAGAGGATGTTAATGTGTTGGCCAATCGGCTGGGTTACTTGGGTTCAAGTCCTAAGTGA 462 0.4719 MMAFLAKAMKNPVFIQKLIQHKEKRKELEDAMTKKMRRPIEQGPSCSTTTVKVENPPEFAGYAGGFGASELQILGMEMQGYGRGRRGSTEHEQEQEQEQEQEQERLDKELDDEGFWEKLFSESFEGDLDISKDEEEDVNVLANRLGYLGSSPK* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0421 153 Coils Coil 89 112 - -
Amo06g0421 153 Coils Coil 18 38 - -
Amo06g0421 153 MobiDBLite consensus disorder prediction 33 55 - -
Amo06g0421 153 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 139 IPR027725 -
Amo06g0421 153 MobiDBLite consensus disorder prediction 77 112 - -
Amo06g0421 153 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0421 Amo-Chr6 5873868 5874329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0421 1 151 HSF AT3G22830 37.079 1.01e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0421 K09419 - gmx:100794264 173.711