Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0416 ATGGGTTCTCTTCCAAACATAGTAGAGGACTGCATGGGGTTCCTCAAACTCTACAGTGACGGTTCCATTTTTCGATCCAACGACATTAAATTTCACGAAACTCCAATCGAAGACGACACCGTTTCATTCAAGGACTGTCTTTATGACAAAAAGTTTAACCTCTTTCTCCGCCTCTACAAGCCTCAATCCAACAACAACGTTGTTAGGAATTCGAAGCTCCCTGTGGTGATGTTCTTCAGAGGTGGAGGCTTCTGTTTCGGGTCACGCACGTGGCCGCACGTGCACAACTGCTGCATGCGCCTCGCATCGGGGCTGAAGGCGGTGGTGGTCACGCCGGACTACAGACTGGCGCCGGAGCACCGGCTACCTGCGGCGGTGGAAGACGCCGTGGAGGCGGTGAGGTGGCTGCAGAGGCAAGCGCTGAGTGTTTGTGGCGATGCATGGTTGAGTAACGGTGGTGACGTTGACTTTGACCGCGTTTTTATAATGGGTGACTCGAGTGGCGGAAACATTGCGCACCACCTGGCAGTTCGGTTCGGACCCGGTTCGAGAGAGATAAAACCAGTTCGAATACGAGGTTACGTGCTGTTGGCGCCATTTTTTGGCGGGGTTGTTCGGACCAAGTCCGAGGAGGGTCCATCGGAGCGCATGCTCACTCTTGACTTACTTGACAGATTTTGGAGGCTTTCGCTGCCTGTTGGAGAGAGCAGAGACCATCCATTTGCAAATCCATTTGGAGTTTGCGGAAATAATCTTAGAGAATTGAAACTTGATCCTATGCTTGTTATGGTTGGTGGCAATGAATTGCTTAAGGATAGGACAAAAGATTATGCAAACAAGTTAAAAGAATTTGGGAAGAACATTGAATATGTTGAGTTTGAAGGGTGCCAACATGGTTTTTTCACTCATCATTCATACTCTCAAGTGGCAAATCAAGTCATCCAAATCCTCACAAGATTCATGCTTCAACTTAATTAA 978 0.4857 MGSLPNIVEDCMGFLKLYSDGSIFRSNDIKFHETPIEDDTVSFKDCLYDKKFNLFLRLYKPQSNNNVVRNSKLPVVMFFRGGGFCFGSRTWPHVHNCCMRLASGLKAVVVTPDYRLAPEHRLPAAVEDAVEAVRWLQRQALSVCGDAWLSNGGDVDFDRVFIMGDSSGGNIAHHLAVRFGPGSREIKPVRIRGYVLLAPFFGGVVRTKSEEGPSERMLTLDLLDRFWRLSLPVGESRDHPFANPFGVCGNNLRELKLDPMLVMVGGNELLKDRTKDYANKLKEFGKNIEYVEFEGCQHGFFTHHSYSQVANQVIQILTRFMLQLN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0416 325 Pfam alpha/beta hydrolase fold 76 301 IPR013094 GO:0016787
Amo06g0416 325 PANTHER ARYLACETAMIDE DEACETYLASE 4 322 - -
Amo06g0416 325 Gene3D alpha/beta hydrolase 16 322 IPR029058 -
Amo06g0416 325 PANTHER CARBOXYLESTERASE 15-RELATED 4 322 - -
Amo06g0416 325 SUPERFAMILY alpha/beta-Hydrolases 4 321 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0416 Amo-Chr6 5577046 5582154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0416 7 300 Carbohydrate Esterase AT5G16080 35.644 2.97e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0416 - - gmx:100783849 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0416 06 5577046 5582154 Amo12g3316 12 122235789 122239568 PCT
Amo12g3316 12 122235789 122239568 Amo06g0416 06 5577046 5582154 PCT