Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0407 CCTACCGAAGTTGATCCCACACAGCTCGACGTTAAGCTCTTCAACAGATGGAGCTTCGACGAGTCCAGGTCCTCCATTCTCATTTCCTTCCTGGTGCCGTCGAAGCATGCGACGTACGTTCCCCACACCGCCGGTAGGTACTCAGTGAAGCGCTCACTAACTCTCCTCATGATGCATGGAAGAAACAACGGTAAGAAGCTTATGGCTGTTAGGATCATCAAACACGCCATGGAAATCATTCACTGCTTACAGACCAGAACCCTATCCAATGGTCCTCGTGAAGATGCAACTCGTATTGGGTCTGCTGGAGTTGTTAGGAGGCAGGCTGTTGATATCTCGCCTCTTCGCCGTGTCAATCAGGCCATCTATCTTCTAACAACAGGTGCACGAGAAGCTGCTTTCAGGAACATTAAGACAATTGCCGAATGCTTGGCTGATGAACTTATTAACGCAGCAAAAGGTTCATCGAATAGCTATGCTATCAAGAAAAAGGATGAGATAGAGAGAGTCGCCAAGGCTAATCGTTAA 528 0.4811 PTEVDPTQLDVKLFNRWSFDESRSSILISFLVPSKHATYVPHTAGRYSVKRSLTLLMMHGRNNGKKLMAVRIIKHAMEIIHCLQTRTLSNGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0407 175 Pfam Ribosomal protein S7p/S5e 51 175 IPR023798 -
Amo06g0407 175 SUPERFAMILY Ribosomal protein S7 13 175 IPR036823 -
Amo06g0407 175 CDD uS7_Eukaryote 12 175 IPR005716 GO:0003735|GO:0006412|GO:0015935
Amo06g0407 175 Gene3D Ribosomal protein S7 domain 1 175 IPR036823 -
Amo06g0407 175 PANTHER RIBOSOMAL PROTEIN S7 3 175 IPR000235 GO:0006412
Amo06g0407 175 PANTHER 40S RIBOSOMAL PROTEIN S5 3 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0407 Amo-Chr6 5509217 5511371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0407 10 175 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 75.263 3.22e-92 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0407 K02989 - gmx:100803239 264.618