Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0380 ATGCCTTCAAGGTGCACTGAGGAGTTCCGCCTCAGGAAGATCAACAATGACAAACTGAAGGCTGAGGCAAAGGCTAATGGACAAAAGATCAGTACCAAGAGAYAGCCTGAGRGACCTAAACCTGGATTCATGGTTGAAGGTGCCACATTAGAGACTGTGACTCCCATTCCATATGATGTTGTCAATGATCTTAAAGGAGGGTATCAGGTTGTTGTTTCTTCATGTGATTATGTAGTAAAAGGAGGAGCTAGAGCCAATGGGGCAAGGATCCCAGAACACTGGTGCCACAAGATGATTCGTTTAAACAAATGTRAGTCACAGAAATGTTATGAGGAGTGCTCTAAAGAACAATATGGCGGTGGAGATTGCAAGGGTGCCACTTGCTTCTGCACATACTATTGTAAAGATCCCCCACTCTACTAA 423 0.4397 MPSRCTEEFRLRKINNDKLKAEAKANGQKISTKRXPEXPKPGFMVEGATLETVTPIPYDVVNDLKGGYQVVVSSCDYVVKGGARANGARIPEHWCHKMIRLNKCXSQKCYEECSKEQYGGGDCKGATCFCTYYCKDPPLY* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0380 140 Gene3D - 3 60 - -
Amo06g0380 140 PANTHER 60S RIBOSOMAL PROTEIN L21 2 68 IPR001147 GO:0003735|GO:0005840|GO:0006412
Amo06g0380 140 Pfam S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) 92 134 IPR010851 -
Amo06g0380 140 MobiDBLite consensus disorder prediction 23 43 - -
Amo06g0380 140 PANTHER 60S RIBOSOMAL PROTEIN L21-1 2 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0380 Amo-Chr6 5249648 5251960 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0380 3 68 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 81.818 1.35e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0380 K02889 - gmx:100305629 129.028