Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0347 ATGCTTGTGTTTCCTTCTTGTGATTTCCCTGCTAGTGGGGCCTTGTTGTTTGATCATGAAGTTGCTTATTTGTCTCCACTTTTAGCATTTAATCTAAATTTGCACATGTCATGCTTAAAATCCATTCTACAACATGGGGAGGACACTTTAGCTTCTTATTTCAAGCCCCAATTTTGTAATGAGGATGCTGCAAAAAGCAATGAGGATTATGTTATCAATGTTGAGTTGGCACCTTTTGCTCAAGCTCTTAGGTTTGCATCACATTTGAGGGTTTCTTTTGTGAAGATGCCAGAATGTGGCATCCTTGAATCTATTAGAGAAAGTTCACCTATTGAATCTAAAGAACGGCAAGACATGATTGACTTAGCATTACAAAAGTACTTCGAAAAATATGTCAGGTTCTTGTTAGAGTGTAACTTATATCCTCAGGTCATTGCTATGGAACCATCAGATGAACTTTCACCATCCGCCCTTCCTCCAGATTTGTTAATTGCTGGACCAGAAGGACCTGTGCCGTTGCAAGGAGACACAGTAAAGATATTGGGTTCAATACTTACACCAACTTTCTGTCCATCGGCCCTTTCTTCGAAGTTTAGAATTTCAGTTCTATTGTATGGCTTGGCAGGTTGTGGGAAGAGAACTGTAGTTAGATATGTTGCTCCTTTCAAGACAGCTCAAAGATACTCACCAGCAATACTTCTTCTACGGCATTTTGATGTTTTTCGAGATTCACCTTCTCCCGATGGTTCACTAAATGATCAAAGAGGCAATACATCTGAAGTAGCATCTGTTATCAGGAGATTCACTGAACCAATTAATATTTACTTTTGCAACATGCTGGTGAAGGTTGAGAAGAATGTTGAGAAAACAAGCGTGCATCAAATCCTCTTGATTGCTGCTGCTGACAGCTCAGAAGGTCTACCTCCAACTATCAGACGCTGCTTTAGCCATGAAATAAGTATGGGACCTTTGACTGAAGAGCAAAGGACTGAAATGTTATCCTACTCACTTCAAAGTGTTTCTGGACTCCTCTCTGATGCTGATTTGGAGGGTTTTGTAAAAGAAATAGTTGGTCAAACATCTGGTTTTATGCCCAGGGATATGTGTGCTCTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGGAACGATACTGAAGTGGACAAACATAGTTTTGAGGATATAGATGCTTCTTCTAGTTCCAAAGTGACACAGGAGAAGGAGAAAGTTTCACCTCAAATTCCTAGGAAGGAAGATTTGATGAATGCTTTAGAACAATCAAAGAAAAGAAATGCATCAGCATTGGGCACTCCAAAAGTTCCCAATGTGAAATGGGAAGATGTCGGTGGGCTTGAAGAAGTCAAAAAATCAATCCTGGATACCGTTCAGTTGCCCCTCCTGCATAAAGATCTTTTTGCATCTGGATTACGAAAGAGATCCGGCGTTCTTCTTGTAAAAGGTCCTGAACTGATAAACATGTACATCGGAGAGTCTGAGAAGAATGTTAGAGACATTTTCCAGAAGGCCAGATCAGCACGTCCATGTGTTATCTTCTTCGATGAGCTTGATTCTCTCGCCCCAGCTCGGGGTGCTTCTGGAGATTCTGGGGGCGTTATGGACAGGGTGGTTTCTCAGATGCTAGCCGAGATCGATGGCTTAAGTGATTCGACACAGGATCTGTTTATTATTGGTGCAAGTAATAGACCGGATTTGATAGATCCGGCACTTCTACGGCCCGGTAGATTCGATAAGCTTCTATATGTTGGAGTTAACTCCGATGCGTCTTATAGGGAGCGGGTCTTGAAAGCACTAACTCGAAAGTTCAAGTTGCACGAAGATGTTTCACTGTACTCTATAGCGAAAAAATGTCCGCCGAACTTCACCGGAGCTGACATGTATGCATTGTGTGCAGACGCCTGGTTCCATGCCGCAAAGCGCAAGGTTTCGAGCACAAATCCGGAGTCTTCCAGCCAAGATAGTGAAGCAGATTCTGTAGTTGTTGAATACAGTGATTTTGTCCAGGTCCTAGTAGAGCTGTCTCCTTCCCTATCCATGGCTGAGCTCCAGAAGTATGAGAAACTTAGAGATCAGTTTGAGGGCACGTCTAAATAA 2112 0.4233 MLVFPSCDFPASGALLFDHEVAYLSPLLAFNLNLHMSCLKSILQHGEDTLASYFKPQFCNEDAAKSNEDYVINVELAPFAQALRFASHLRVSFVKMPECGILESIRESSPIESKERQDMIDLALQKYFEKYVRFLLECNLYPQVIAMEPSDELSPSALPPDLLIAGPEGPVPLQGDTVKILGSILTPTFCPSALSSKFRISVLLYGLAGCGKRTVVRYVAPFKTAQRYSPAILLLRHFDVFRDSPSPDGSLNDQRGNTSEVASVIRRFTEPINIYFCNMLVKVEKNVEKTSVHQILLIAAADSSEGLPPTIRRCFSHEISMGPLTEEQRTEMLSYSLQSVSGLLSDADLEGFVKEIVGQTSGFMPRDMCALIADAGANLFPRNDTEVDKHSFEDIDASSSSKVTQEKEKVSPQIPRKEDLMNALEQSKKRNASALGTPKVPNVKWEDVGGLEEVKKSILDTVQLPLLHKDLFASGLRKRSGVLLVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVSSTNPESSSQDSEADSVVVEYSDFVQVLVELSPSLSMAELQKYEKLRDQFEGTSK* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0347 703 Gene3D - 440 485 IPR027417 -
Amo06g0347 703 Gene3D - 487 692 IPR027417 -
Amo06g0347 703 SMART AAA_5 198 593 IPR003593 -
Amo06g0347 703 MobiDBLite consensus disorder prediction 393 413 - -
Amo06g0347 703 ProSitePatterns AAA-protein family signature. 560 578 IPR003960 GO:0005524|GO:0016887
Amo06g0347 703 Gene3D - 324 410 - -
Amo06g0347 703 CDD AAA 449 589 - -
Amo06g0347 703 Gene3D - 222 417 IPR027417 -
Amo06g0347 703 PANTHER AAA-FAMILY ATPASE 485 699 - -
Amo06g0347 703 PANTHER AAA-FAMILY ATPASE 17 484 - -
Amo06g0347 703 Gene3D - 591 677 - -
Amo06g0347 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 441 697 IPR027417 -
Amo06g0347 703 PANTHER PEROXISOME ASSEMBLY FACTOR 2 17 484 - -
Amo06g0347 703 PANTHER PEROXISOME ASSEMBLY FACTOR 2 485 699 - -
Amo06g0347 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 393 IPR027417 -
Amo06g0347 703 Pfam ATPase family associated with various cellular activities (AAA) 482 589 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0347 Amo-Chr6 4969529 4974408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0347 465 656 Calmodulin-binding Proteins AT3G56690 36.410 2.91e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0347 K13339 - gmx:100820183 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0861 16 13824359 13830209 Amo06g0347 06 4969529 4974408 hybridization