Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0345 ATGGACTTCCCGAACGACGATTTCCTTGAGCTTCCGATTGGGAACTCCGCCGAGTCGTTGCAGAGGTTCTTGGCTTCGCAGAGAGACCTCTTCCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACGCAATGCAAACTCACCGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGTGCTCTTTCAATAAAGATCGGTAAAAGACCAAGGGATTTATTAAATCCGAAGGCCGTTAATTACATGCAATCTGTTTTTTCTATTAAGGATGCAATTAGCAAGAAAGAATCTCGAGAGATTAGTGCTTTATTTGGTGTCACAGTAACACAGGATGAGCTAATAAACTCTGATCCTATGAGACCAATAAATCCAGCTCCCTTAAATTCTATCATGCCCAGCAATGCTGAAGGCGCATCTTGTTCAACGCAGGATGCAGCTTTGTCTGACCTAGATGACTTAGATAAGAAATTYGTTGATAATATTTTTAGTCTAATGGAGAAGGAGGAGTCATTTTCTGGGCAGGAGAAACTGATGGAGTGGATATTGACAATACAGAACTTTTCAGTGTTGTTGTGGTTTCTGACCAGAGGAGGTGTGATGATTTTAGCAACTTGGTTGAGTGTAGCAGCTGTTGAAGAGCAAACAAGTGTCCTCCTTCTTATCTTGAARGTTCTTTGTCATTTGCCTTTACACAAAGCCCTTCCTACACACATATCAGCTATATTGCCGTGTGTTAATAGATTGCGGTTCTACAGGACATCAGGTGTACTTTTTGCTCTTCCTGTCYGAATTGCATCTGAATGTGGTGGTTTGATAGCTTATTATGTAGTAGAAAGATTTGAATTTGTTGAACCTCCTTTCTCAACTGTATATTCTCATCCGTGCAGTATTGGTCAAATTATGGGCTCTGAATCATGGGATTCAAATATGAATGTCCATGAAGACATTCTTGCTCTCTCTAATGATCATTCAGATAATTTCAGGAAACTGGAATCTTCCCACGCTGTGAAATTGTTGCCATCCAGCTCAGATGATTCTAATAAGAAGCTTGCTCTTGGTGTTTCTTCATCTCAATCAAATGGCCCTAGAGAGCGCAGAAAAGTGCAACTGGTGGAACAGCCAGGCCAAAAATCAGTGACCAGAAGCCCACAGGCGACAAGAGTAGCCCCTATAAATCAAGGTCGTCCTATGTCTGCTGATGATATACAGAAAGCRAAAATGCGTGCTTTATTCATGCAGAGTAAGTATGCAAAAAATGGGTCTTCCAAGGAAAATAAAAATGTGAAGATCGATGGTTTGCATAAGCATCAGACRAATCAGGCCAGTATTGCAGCTTGCTCTGCTAAAGTTCCTGTTCCACCCAGAATTGAAGATGATAAAAGGACCTCATTGCTTCCCTCTAGTAAGGCCACTAATAGGCTGGAAACATCTTATTCTAAACCTAGAAYGGATGCAAATGAACCAGTGTGGGAGAAGTGCAAGMGGGTGCAAATCCCATGGAAGACACCAGCAGAAGTGAAACTCAGAGATACATGGAGTGTTGGTGCTGGTGAAAATAGCAAAGAGGTTGATGTCCAGAAAAACAGAAACCGCAGGGAGAAGGAAACTATTTATCAGACTGTCCAAGAGATACCATCTAATCCCAAAGAGCCATGGGACCTCGAGATGGACTATGATGACACTTTGACACTGGAAATTCCCATTGAACAGCTGCCGGATGTTGATGGTGCAGAACTAGCATTTGCCCCTGATGAGGTTGCAACTCATGCTGTTCAAGGSGTASCCACACCGTCTTCAACCAGTAATGTAGCTGATACTGCTCAACCTGACTTGGAACTGCTAGCAGTGTTACTTAAAAATCCAGACTTAGTATTTGCCTTAACTTCGGGACAAGGTGGTAGCATCCCAAGTGAGGAAACCGTGAAGGTACTTGACATGATCAAGAGAGGTGATATGAACTTGGGTACACATGATACAAATMATGGAAATGRCATTAGTGCAAAGCCCACAGAGAWGGTGGAAGTTTCACTCCCCTCACCAACTCCTTCAAGTGATCCAAGAACGGTGCGTGACTTTGAGTTCATACTACAACTATTTGTCAAAGATGTTATCATGTTTGATATCTTCCATTGCAGTTCCATGCACACTCCACTTAGCCATCTCAGCTCGAAATGGGTTTTTCAATCGTGGCCCAAATTGAATTCTTCCCCATTTCCCCGAGGGAGTTTTGGTCAAGTTGTTATGTTCCACGGTGTGCTTCGATGCCATAGTGGATGGAGCACAATGCCACCAAAGAATCCYTTTTCACGGCAAAGCTTAGCACCAGCTAGAAGCTATCCTGCAGTGGCAACTACCAACTTAATATCTCAGGTTCCAGCAATCGGCACTACAGTAATAAGGCAGCAGCCAACAATGGCGCTTCCATCTTCAAATCCATTCACTAGCACAGTAGTTTCTTCATATTCACTGCCTCAGGCAACTATTGTACCTGAGACAGAGATGCAACCACCCCTCGCTCTTTCCTCTCTGCATGTACAACAAACACCACTCTCAGATATAGGTTTAACCATGAAGAACAAAACTAGTACAAATCCGTCTTCAGTTAACTTACCTGGCGCACATTCACCTTTAGCGATGCGGGTCAACGGCACCAGTAATGTAAAACCAGTACCTAATATGAGTGTTGAAGACGGTTTGTCTAATTCATTTCCSCAATCCTTCAGGTTGGCCTCAACAACCCCTTCACTTTCAGCCACACAACWACAACAAAGACATGCACACTTGGCCTCTCAGCAAGCCCATTTCCCTGARCCTTCATACCGCAACAGTGTACATTCCTATCCACCRCCACAAATTGAAAAACCAGGTCAAGTTTCAGATTCTTGGAGAGTTAGGCAAGATGTGCCATCATCCAGTTACCATTCCAATAGAAATCAAAACTACTATGACAATGCATATGTTGGGGGTTCCATGCAGGCTGGTCCTTCTTGGGATAGAAACAATCAKGCARCAAGGGAACAATATGAAACATGGAGCCCAGATAATAGTCCAACTAGAAATCCTAGGTATGTTCCTGGTAGGAGTTACCCAGAGTCCAGAGTGAATCAGCATGGAAGAAACCATAGGCCTGATTGGTCAAGGCAGCGTGGTTCTTCTGGACATTGGGACCCTGCTAGGCAGGGAAACAGAAAGTGGCATGACGAGAGACGATGA 3216 0.4347 MDFPNDDFLELPIGNSAESLQRFLASQRDLFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQDELINSDPMRPINPAPLNSIMPSNAEGASCSTQDAALSDLDDLDKKFVDNIFSLMEKEESFSGQEKLMEWILTIQNFSVLLWFLTRGGVMILATWLSVAAVEEQTSVLLLILKVLCHLPLHKALPTHISAILPCVNRLRFYRTSGVLFALPVXIASECGGLIAYYVVERFEFVEPPFSTVYSHPCSIGQIMGSESWDSNMNVHEDILALSNDHSDNFRKLESSHAVKLLPSSSDDSNKKLALGVSSSQSNGPRERRKVQLVEQPGQKSVTRSPQATRVAPINQGRPMSADDIQKAKMRALFMQSKYAKNGSSKENKNVKIDGLHKHQTNQASIAACSAKVPVPPRIEDDKRTSLLPSSKATNRLETSYSKPRXDANEPVWEKCKRVQIPWKTPAEVKLRDTWSVGAGENSKEVDVQKNRNRREKETIYQTVQEIPSNPKEPWDLEMDYDDTLTLEIPIEQLPDVDGAELAFAPDEVATHAVQGVXTPSSTSNVADTAQPDLELLAVLLKNPDLVFALTSGQGGSIPSEETVKVLDMIKRGDMNLGTHDTNXGNXISAKPTEXVEVSLPSPTPSSDPRTVRDFEFILQLFVKDVIMFDIFHCSSMHTPLSHLSSKWVFQSWPKLNSSPFPRGSFGQVVMFHGVLRCHSGWSTMPPKNPFSRQSLAPARSYPAVATTNLISQVPAIGTTVIRQQPTMALPSSNPFTSTVVSSYSLPQATIVPETEMQPPLALSSLHVQQTPLSDIGLTMKNKTSTNPSSVNLPGAHSPLAMRVNGTSNVKPVPNMSVEDGLSNSFPQSFRLASTTPSLSATQXQQRHAHLASQQAHFPEPSYRNSVHSYPPPQIEKPGQVSDSWRVRQDVPSSSYHSNRNQNYYDNAYVGGSMQAGPSWDRNNXAXREQYETWSPDNSPTRNPRYVPGRSYPESRVNQHGRNHRPDWSRQRGSSGHWDPARQGNRKWHDERR* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0345 1071 MobiDBLite consensus disorder prediction 880 940 - -
Amo06g0345 1071 MobiDBLite consensus disorder prediction 964 987 - -
Amo06g0345 1071 MobiDBLite consensus disorder prediction 349 397 - -
Amo06g0345 1071 MobiDBLite consensus disorder prediction 349 365 - -
Amo06g0345 1071 MobiDBLite consensus disorder prediction 1035 1050 - -
Amo06g0345 1071 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 111 - -
Amo06g0345 1071 MobiDBLite consensus disorder prediction 860 1071 - -
Amo06g0345 1071 MobiDBLite consensus disorder prediction 466 480 - -
Amo06g0345 1071 MobiDBLite consensus disorder prediction 1004 1023 - -
Amo06g0345 1071 MobiDBLite consensus disorder prediction 454 481 - -
Amo06g0345 1071 MobiDBLite consensus disorder prediction 374 392 - -
Amo06g0345 1071 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 757 1071 - -
Amo06g0345 1071 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 116 690 - -
Amo06g0345 1071 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 757 1071 - -
Amo06g0345 1071 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 1 111 - -
Amo06g0345 1071 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 116 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0345 Amo-Chr6 4909799 4917742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0345 486 687 Homeobox Transcription Factor Family AT4G02560 50.000 5.20e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0345 - - adu:107492506 1856.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0863 16 13888345 13895203 Amo06g0345 06 4909799 4917742 hybridization