Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0331 ATGCTCTTCCTTCTGGTTCTGCTTGCTGCTGCGGCGTCCACCATGATCGCCGCCGGCCGTCTCGCCGGAATTCTGCTGTTTTCTTCTCCTGACGATGCTTCTCACCGCTTTCGAGTTCGCCGAGAGAGAATGCCGGCGTCAGTTTTCTTCCTCCTCGTTCTTCTCAACTTGCTACTATCTTGCTCAGTGAAGTCGGTTTCTGTGAGTGTTTCATATGTCTCATCAGAACGAGCTAAAACTTGGTTAGTTAAACCTTCTTCTGGACCATCTACTTCACCTGGACCTGCTGCACCTGTACCTGCACCATCTCCATCATATCAAGGTCCTATTGTGCATCCAAGTCCAAAACATCGCTATCATCATCATCACCATCGTAGCGTAAAACCTTATCCAGTCGCTCCACCCCCTTCTAAAGACCAAGGTTGCGACCAAATCTGTACGGATCCACTCACATCAACACCTTTTGGGTCACCTTGTGGTTGTGTATTTCCCATGAAAGTCAGACTCACGCTGGGTGTAGCTCCTTATGCTGTCTTTCCAGTAATGAATGAATTAGAGATTGAAGTTGCATTAGGCACATACTTAGAGCAGAGTCAGGTGAAGATAATGGGTGCTAGTGCTGATAGTGAGAATCAGGGAAGAACTGTAGTTGATATAAACTTGGTTCCATTGGGAGAGAAATTTGACAATACTACTGCAGCTCTGACATATGAGAGGTTCTGGCACAAGAAAGTCCCACTAAATAGAAGCCTTTTTGGTGATTATGATGTTTTGTACATTGCCTATCCAGGAATTTCTTCATCGCCACCGTATGCATATGGAACCATAGCTGGGGATGCTCCTATGGAAAGTGTAACTGGTAGTCTACCAGTCTCTGCCAACTTTGTCAACAAGAATCAGAGAATGAATCTCAGAACCATAATCATCATTGCTTCGTCTTCCTTTGTACTTTTATTGGTTTTAGTTGGAGCAGTTTCTATCATTTTGAAATGTCAGAAGATTAGGAGGCCATCGAGTGCTGTTGGCCCTGCATTCACTTCATCTCTAAACAAGAGATCTGGCTTGGGTTCTATGTTGTCAAGCAGTATTACAAGCTCGACATCAGTGTCCCTTATGTCCACAATGGCTGCTTCCATTCTCTCTGTTAGAACATTTTCGCTTTCTGAGCTCGAGAAAGCTACAGATAAGTTTAGTTCAAAGAGAGTATTAGGAGAAGGAGGATTTGGACGAGTTTACAGTGGGACATTGGAAGATGGGGCTGAAGTTGCAGTTAAGCTGCTGACTAGAGATAATCAGAATGGAGATCGTGAATTTATTGCAGAAGTTGAAATGCTTAGCCGATTGCATCACCGGAATCTTGTTAAACTACTTGGTATATGTATCGAAGGGCGCCGACGTTGCTTGGTGTATGAGCTTGTTCACAATGGCAGTGTTGAGTCACATTTGCATGGTGTTGACAAGAAAAAGGGACCTCTAGATTGGGAAGCACGAATGAAAATTGCACTTGGAGCAGCAAGAGGTTTGGCATATCTTCATGAGGATTCTAATCCTCGTGTAATTCATCGAGATTTTAAAGCTAGCAATGTGCTACTAGAAGATGACTTTACCCCGAAGGTTTCTGATTTTGGATTGGCACGAGAAGCAACTGAAGGAAGTCAGCATATTTCTACAAGGGTGATGGGAACTTTTGGGTACGTTGCCCCAGAATATGCGATGACAGGTCATTTACTCGTTAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTCTTACTGGCAGAAAGCCAGTGGACATGTCTCAACCTCAGGGACAGGAGAATCTAGTAACTTGGGCAAGACCATTGTTGGCGAGCAGGGAAGGTTTAGAACAGCTAGTGGATCCATCTTTGGCTGGAAGTTACGACTTTGATGACATGGCAAAGGTTGCTGCTATCGCCTCCATGTGCGTTCACCCAGAGGTCACACAGAGACCCTTCATGGGTGAAGTCGTGCAGGCTCTTAAGTTAATATACAATGATGCAGACGAGACTTGCGGAGATTACTGCAGTCAGAAGGACTCCTCCGTACAGGATTCTGATTTCAGAGGCGATCTCGCCCCTTCCGATAGCAGTTGGTGGAATGCCGGAGGGTTAACCCCTCGATTAACTTATGGGCAAGCATCATCTTTCATCACCATGGAGTACAGTTCTGGTCCACTTGATGATATGGAAAACAGACCGTTTTCGACTTCAAGCTTGATCGGAGATGAGATGTCTTTACCGATTAAGCATGGGAACAGATCAGGTCCGTTGAGAACAGTCCGAAGTAAGTTATCATTGCATAGATTTACAGGAAGCCGGAGTGAACATGGGGGACCTTCTTCCAAGCACCATTGGAACGATGGTTACTGGGCTTAA 2403 0.4499 MLFLLVLLAAAASTMIAAGRLAGILLFSSPDDASHRFRVRRERMPASVFFLLVLLNLLLSCSVKSVSVSVSYVSSERAKTWLVKPSSGPSTSPGPAAPVPAPSPSYQGPIVHPSPKHRYHHHHHRSVKPYPVAPPPSKDQGCDQICTDPLTSTPFGSPCGCVFPMKVRLTLGVAPYAVFPVMNELEIEVALGTYLEQSQVKIMGASADSENQGRTVVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSLFGDYDVLYIAYPGISSSPPYAYGTIAGDAPMESVTGSLPVSANFVNKNQRMNLRTIIIIASSSFVLLLVLVGAVSIILKCQKIRRPSSAVGPAFTSSLNKRSGLGSMLSSSITSSTSVSLMSTMAASILSVRTFSLSELEKATDKFSSKRVLGEGGFGRVYSGTLEDGAEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLLGICIEGRRRCLVYELVHNGSVESHLHGVDKKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPLLASREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDADETCGDYCSQKDSSVQDSDFRGDLAPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLDDMENRPFSTSSLIGDEMSLPIKHGNRSGPLRTVRSKLSLHRFTGSRSEHGGPSSKHHWNDGYWA* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0331 800 MobiDBLite consensus disorder prediction 91 109 - -
Amo06g0331 800 SUPERFAMILY Protein kinase-like (PK-like) 381 670 IPR011009 -
Amo06g0331 800 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 48 797 - -
Amo06g0331 800 MobiDBLite consensus disorder prediction 778 800 - -
Amo06g0331 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Amo06g0331 800 MobiDBLite consensus disorder prediction 83 138 - -
Amo06g0331 800 Pfam Protein tyrosine and serine/threonine kinase 399 668 IPR001245 GO:0004672|GO:0006468
Amo06g0331 800 Gene3D Phosphorylase Kinase; domain 1 368 472 - -
Amo06g0331 800 CDD STKc_IRAK 403 672 - -
Amo06g0331 800 MobiDBLite consensus disorder prediction 114 128 - -
Amo06g0331 800 Gene3D Transferase(Phosphotransferase) domain 1 473 695 - -
Amo06g0331 800 ProSitePatterns Protein kinases ATP-binding region signature. 403 425 IPR017441 GO:0005524
Amo06g0331 800 PANTHER OS01G0750732 PROTEIN 48 797 - -
Amo06g0331 800 ProSiteProfiles Protein kinase domain profile. 397 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0331 Amo-Chr6 4764143 4770499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0331 145 789 Receptor kinase-like Gene Family AT5G56890 53.823 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Amo06g0331 PK_Tyr_Ser-Thr 6.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0331 - - gmx:100792309 1244.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1568 16 29078723 29085014 Amo06g0331 06 4764143 4770499 hybridization