Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0320 ATGGCACCTAATGAAGACTCAGCAACAAAATTAACAGCACTTGTTGTGGATGATGATAGACAAGTAAGGATGATTCATCAGTGGATGCTGAACAAAGTTGGAGTGAAGAATCAGGCAGCGGAGAATGGAAAAGAAGCCGTACAAATTCATTGCTCTGGTCAAGGATTTGACCTCATTCTCATGGACAAGGAAATGCCTTTGATGAATGGCATTGAGGCAACAAAGGAACTTCGTTCAATGGGCATTTGTAGCAAAATTGTTGGGGTGTCATCTCACTCAGAGGAAAAGCAAATACAAGAATTTATGGAAGCAGGGCTTGATGATTATCTAGTCAAACCTTTGAACATGGCTAAGCTGCGTTCAATTCTTGATAATATCATGTGA 384 0.4036 MAPNEDSATKLTALVVDDDRQVRMIHQWMLNKVGVKNQAAENGKEAVQIHCSGQGFDLILMDKEMPLMNGIEATKELRSMGICSKIVGVSSHSEEKQIQEFMEAGLDDYLVKPLNMAKLRSILDNIM* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0320 127 Pfam Response regulator receiver domain 14 123 IPR001789 GO:0000160
Amo06g0320 127 SUPERFAMILY CheY-like 10 126 IPR011006 -
Amo06g0320 127 SMART REC_2 11 123 IPR001789 GO:0000160
Amo06g0320 127 Gene3D - 1 127 - -
Amo06g0320 127 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 126 - -
Amo06g0320 127 ProSiteProfiles Response regulatory domain profile. 12 127 IPR001789 GO:0000160
Amo06g0320 127 CDD REC_hyHK_CKI1_RcsC-like 14 123 - -
Amo06g0320 127 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 5 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0320 Amo-Chr6 4661861 4662353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0320 11 127 Response Regulator Gene Family AT3G04280 44.538 7.18e-29 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo06g0320 Response_reg 4.6e-26 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0320 - - gmx:100794931 160.229