Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0313 ATGAGACGGCGCCCCGTTACGGGCGTTCTCTCCGATCAGATGGAGAAGTCTGCGCCCAAGAATCAAAATTCTCGAATCTGCTTCCTCGCCGCTCTCTCCGCTTTCTTCTGGCTCCTCCTCCTCTACTTCCATTTCGTCTTCATCAACCCCACTACTTTCGACGCCAATAAAGACGAAGATGATGATTCCAATGAATTACCTGTACAGCGGCTCCAGCCTCCGCCGCGGAAGCAGATTGGCTTCCCCGATCTCGATTCAGATTCCCAAAACCTAAACAAAAACCCTAATAATTCTCCTCTAAAGGAGAGGAATTTCCCCTTCATGAAAGCGCTGACAACCGCAGACAACAAGAACGACCCTTGCGCTGGAAAGTACATTTATGTCCACGATCTTCCATCGAGGTTCAACGAGGACATGCTCAAAGAGTGCAGAAGCTTGAGCCTTTGGACCAACATGTGCAAGTTCACCACAAATGCTGGCCTTGGTCCACCCCTCGAGAACGTTGAAGGTGTTTTCTCCAACACCGGTTGGTACGCCACAAACCAGTTCGCAGTTGATGTTATCTTCAGCAACAGGATGAAGCAGTACGAGTGCTTGACCAAGGATTCCTCCATTGCCGCCGCATTCTTCGTGCCGTTCTACGCCGGATTCGACATTGCACGGTACCTTTGGGGCTACAATATCTCAATGAGGGACGCTGCGTCGCTTGATTTGGTTGATTGGCTCATGAAAAGACCGGAATGGAAGATCATGGGCGGGAAGGATCATTTTCTTGTTGCTGGAAGGATAACATGGGATTTCAGGAGGTTGAGTGAGGAAGAATCTGATTGGGGGAACAAGCTTCTGTTCTTGCCTGCGGCGAAGAACATGTCTATGCTTGTGGTTGAATCCAGTCCTTGGAATGCCAATGATTATGGGATCCCTTATCCGACATATTTTCACCCTGCCAAAGATGAAGATGTTTTTGTTTGGCAGGATAGGATGAGGAAGTTGAAGAGGAAATGGTTGTTCTCATTCGCAGGAGCGCCTCGCCCGGACAATCCGAAATCCATTAGGGGGCAGATAATTGAGCAGTGCAGGAGTTCAAAAGTTGGAAAGCTCTTGGAGTGTGATTTCGGGGAGAGCAAATGCCATTCCCCTAGCAGCATTATGCAGATGTTTCAGAGTTCACTATTCTGCCTTCAGCCACAGGGCGATTCGTACACGAGAAGATCCGCTTTTGATTCAATGCTGGCTGGTTGCATTCCTGTTTTCTTCCATCCGGGTTCGGCTTATACACAATATACTTGGCATCTTCCTAAGAATTACACCAAGTATTCCGTGTTCATCCCTGAGGATGATATTCGCAAGAGGAATGTGAGCATTGAGGAGAGGCTTAGTGAGATTCCACCGGAGCAAGTGAGCATCATGAGGGAGGAGGTTATTAGTCTCATTCCTAGGCTAGTGTATGCAGATCCTCGTTCCAAGTTAGAGACCCTTAAGGATGCGTTTGATGTTTCGGTGCAAGCAATCATTGACAAGGTTACCAATCTGAGGAAGGACATGATTGAGGGCCGCACAGATGAGAACTTCATTGAGGAGAACAGTTGGAAGTATGCATTGTTGGATGAGGGGCAGCGCGAGTTCAAATACTTGCAAAACTTGCCTGATGTTCTATCCATTAAACCGGACAGGTTGCTTCAGCTTCAAACCACCTACTCTTACAAATTCTTGGGGCTCAACCCTGCTAGAGAAAACGGTTGGTATCAATCCGGATTTGGCCGCGGAACCATAATCGGAGTTCTAGACACCGGAGTGTGGCCGGAGAGTCCTAGTTTCAACGATCAAGGGATGCCGCCGGTTCCGAAGAAGTGGAAAGGTATATGCCAACAAGGACAAGCCTTTAACTTTTCTAATTGTAACAGAAAACTCATTGGTGCGAGGTACTTCACAAAAGGTCACCTTGCGGTTTCGCCTTCGAGGATTCCGGAGTATCTCTCTCCCAGGGATTCCTCTGGCCACGGCACTCATACCTCGTCCACGGCGGGTGGCGCTCCGGTCACCATGGCAAACGTGTTCGGGTATGCGGCCGGCGTGGCCAGAGGAATGGCACCGGGTGCTCACATTGCAGTTTACAAAGTCTGCTGGTTCAATGGCTGCTACAATTCCGATATCATGGCGGCCATGGATGTTGCGATTCGCGACGGCGTGGACGTCCTCTCTTTGTCAATAGGCGGCTTTCCGGTGCCTCTTTTCGACGATAGCATCGCCATTGGAAGCTTCAGAGCAATGGAGCATGGAATTTCGGTCATTTGTGCAGCAGGGAATAATGGACCTACAGCAATGTCTGTTGCCAATGAAGCTCCATGGATTGCCACGATCGGCGCAAGTACAGTGGATAGAAAATTTCCGGCTATCGTCCGCTTGGCGAACGGAAAGATTCTCTATGGAGAATCAATGTATCCGTTCGACAGGAGAACGCGAACCGGAGAAGAACTCGAGGTAGTTTATTTGTCTAATGAAGACACAGAGTCTCAGTTTTGCCTCAGAGGCTCTCTTCCAAGGGAGAAGGTGAAAGGAAAAATGGTGGTTTGTGACAGAGGTGTTAATGGCAGATCAGAGAAGGGACAGGTTGTGAAGGAAGCTGGTGGTGCTGCTATGATTCTTGCGAATACAGAGTTGAATTTGGAGGAAGATTCCGTGGATGTTCATGTTCTGCCTGCAACTCTGATAGGATTTGATGAATCAGTTATCCTCAAGAATTATATAAACTCCACTGCAAGGCCTCTGGCTCGAATCGAATTCGGAGGAACTGTGATTGGAAGGACTAGAGCTCCACAGGTGGCAAGGTTCTCGGCCCGTGGGCCGAGTTATTCCAATCCTTCGATCCTTAAACCGGACGTTATAGCTCCGGGAGTTAACATAATTGCGGCCTGGCCTCAGAACCTCGGTCCGACCGGGCTCCCGGAAGATTCTAGGAGAGTGAACTTCTCTGTTATGTCTGGTACTTCAATGTCTTGTCCTCATGTTAGTGGAATAGCGGCGTTAATCCGCTCGGCTCACCCTGCATGGTCTCCTGCGGCCGTCAAGTCAGCTATCATGACGACCGCAGAGATAACAGACCATGCAGGGAGAGCTATACTGGACGAGGACAAGCAGGCTAGCGTTTTCGCTACCGGCTCCGGGCATGTGAATCCTCAGAGAGCCTTGAATCCGGGGCTGGTATATGATATTCGGCCGGAGGATTACGTGGCACACCTTTGCAGCCTTGGATACACAATGTCAGAGGTGTTTAGCATAACTCATAGGAATGTGAGCTGCCATGAGATGTTGAAGGTGAATAGAGGGTTCAGCCTTAACTATCCTTCTTTCTCTGTGAGTTTTAAGGGTGGGATGAGCAGGAAGATGTTTAGCAGAAGAGTTACAAATGTTGGGAGTCCTAATTCCATTTACTCGGTGGAGGTTATGGCACCAGAAGGAGTGAAAGTGATAGTGAAACCAAAGAAGCTTTTCTTCAAGAGAAGAAATCAAAGCTTGAGTTATAGGGTTTGGTTTTTGTCAAGAAAAAGGGTTAAGAAAGGTAATGGGATGGATTTTGCACAAGGGCATTTGACTTGGTTGCACTCTCAGAAAGGTTCTTACAGGGTTAGAAGCCCAATTGCAGTGACTTGGAAGTCTTAG 3660 0.4863 MRRRPVTGVLSDQMEKSAPKNQNSRICFLAALSAFFWLLLLYFHFVFINPTTFDANKDEDDDSNELPVQRLQPPPRKQIGFPDLDSDSQNLNKNPNNSPLKERNFPFMKALTTADNKNDPCAGKYIYVHDLPSRFNEDMLKECRSLSLWTNMCKFTTNAGLGPPLENVEGVFSNTGWYATNQFAVDVIFSNRMKQYECLTKDSSIAAAFFVPFYAGFDIARYLWGYNISMRDAASLDLVDWLMKRPEWKIMGGKDHFLVAGRITWDFRRLSEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDYGIPYPTYFHPAKDEDVFVWQDRMRKLKRKWLFSFAGAPRPDNPKSIRGQIIEQCRSSKVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDIRKRNVSIEERLSEIPPEQVSIMREEVISLIPRLVYADPRSKLETLKDAFDVSVQAIIDKVTNLRKDMIEGRTDENFIEENSWKYALLDEGQREFKYLQNLPDVLSIKPDRLLQLQTTYSYKFLGLNPARENGWYQSGFGRGTIIGVLDTGVWPESPSFNDQGMPPVPKKWKGICQQGQAFNFSNCNRKLIGARYFTKGHLAVSPSRIPEYLSPRDSSGHGTHTSSTAGGAPVTMANVFGYAAGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDVLSLSIGGFPVPLFDDSIAIGSFRAMEHGISVICAAGNNGPTAMSVANEAPWIATIGASTVDRKFPAIVRLANGKILYGESMYPFDRRTRTGEELEVVYLSNEDTESQFCLRGSLPREKVKGKMVVCDRGVNGRSEKGQVVKEAGGAAMILANTELNLEEDSVDVHVLPATLIGFDESVILKNYINSTARPLARIEFGGTVIGRTRAPQVARFSARGPSYSNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVNFSVMSGTSMSCPHVSGIAALIRSAHPAWSPAAVKSAIMTTAEITDHAGRAILDEDKQASVFATGSGHVNPQRALNPGLVYDIRPEDYVAHLCSLGYTMSEVFSITHRNVSCHEMLKVNRGFSLNYPSFSVSFKGGMSRKMFSRRVTNVGSPNSIYSVEVMAPEGVKVIVKPKKLFFKRRNQSLSYRVWFLSRKRVKKGNGMDFAQGHLTWLHSQKGSYRVRSPIAVTWKS* 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0313 1219 SUPERFAMILY Subtilisin-like 562 1067 IPR036852 GO:0004252|GO:0006508
Amo06g0313 1219 MobiDBLite consensus disorder prediction 83 101 - -
Amo06g0313 1219 CDD PA_subtilisin_like 800 926 - -
Amo06g0313 1219 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 539 1216 - -
Amo06g0313 1219 Pfam Exostosin family 121 458 IPR040911 -
Amo06g0313 1219 ProSitePatterns Serine proteases, subtilase family, serine active site. 995 1005 IPR023828 -
Amo06g0313 1219 Pfam Subtilase family 587 1033 IPR000209 GO:0006508|GO:0008236
Amo06g0313 1219 Gene3D - 793 933 - -
Amo06g0313 1219 MobiDBLite consensus disorder prediction 56 102 - -
Amo06g0313 1219 Pfam PA domain 828 907 IPR003137 -
Amo06g0313 1219 PRINTS Subtilisin serine protease family (S8) signature 587 606 IPR015500 -
Amo06g0313 1219 PRINTS Subtilisin serine protease family (S8) signature 663 676 IPR015500 -
Amo06g0313 1219 PRINTS Subtilisin serine protease family (S8) signature 994 1010 IPR015500 -
Amo06g0313 1219 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 539 1216 IPR045051 -
Amo06g0313 1219 CDD Peptidases_S8_3 560 1030 IPR034197 -
Amo06g0313 1219 Pfam Fibronectin type-III domain 1112 1215 IPR041469 -
Amo06g0313 1219 Gene3D - 1080 1217 - -
Amo06g0313 1219 Gene3D Peptidase S8/S53 domain 589 1076 IPR036852 GO:0004252|GO:0006508
Amo06g0313 1219 ProSiteProfiles Serine proteases, subtilase domain profile. 565 1063 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0313 Amo-Chr6 4574247 4584200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0313 539 1219 Subtilisin-like Serine Gene Family AT1G04110 68.996 0.0 1007
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0313 - - pvu:PHAVU_001G165300g 1504.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1532 16 28255316 28266091 Amo06g0313 06 4574247 4584200 hybridization