Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0303 ATGATTTTGTTAAATGTGGATGCAAAGCTCCATCCAAACTCTGAGGAGTCCGGTAGTTCCTTCGACAACTCGAATTCGGGTTACAACAGCTTATCTTCATCATATGCAGAAGGGGAAGTTCGTCCAGCCCTTTGGATGAGAAGACATTTAGGGTCATTGCATACAGTCAGAATGCATCTGAAATGCTTACCATGGTTAGCCATGCTGTTGATCACCCTGCTCTTGCCATTGGCACCGACGGCCTTAAGTGCTGCTGCTTTGCAAAAGGCCCTTGCAGTTCCCGTGGTTTCACTTCTTAACCCCATTCTAGTTCATTGCATGACTTCTGAGAATCCCTTCTATGAAATTGTCCATCGTGTTAAGCCTCATGAAGTTCCCATGACTCGGCCAGAGCGCCCAATCTTACAAGCTTGCGGCAAAAGCAATAACTAG 432 0.463 MILLNVDAKLHPNSEESGSSFDNSNSGYNSLSSSYAEGEVRPALWMRRHLGSLHTVRMHLKCLPWLAMLLITLLLPLAPTALSAAALQKALAVPVVSLLNPILVHCMTSENPFYEIVHRVKPHEVPMTRPERPILQACGKSNN* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0303 143 PANTHER PHYTOCHROME 80 122 - -
Amo06g0303 143 PANTHER TWO-COMPONENT HISTIDINE KINASE 80 122 - -
Amo06g0303 143 Pfam PAS fold 81 121 IPR013654 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0303 Amo-Chr6 4422920 4423845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0303 5 128 Histidine Kinase Gene Family AT1G09570 36.257 1.71e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0303 K12120 - sspl:121744188 65.855