Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0302 ATGCTTGTGAATTTTTGGCTCAAGTATTTGCCATCCATATTGTTGCACACGCAGACACTCTTGTGCAATATGCTAATGCGAGATGCACCCTTTGGCATCGTATCACAGAGCACTAATATAATTGATCTTGTGAGATGCGATGAAGCAACACTCTTGTATAGAGACAAGGTATGGAGATTAGGTGTGGCTCCAAGTGAATCTCGGATAAGAGAGTTAGCTTTATGGCCCTCAAAGTGCCATAAGGACTCCACGGGTTTGAGTACAGATAGCTTGTCTAATGCAGGCTTCCCAAGAGTTGCTGCTCTTGGTGACGTTGTTTGTGGAATGGTAGCTGTGAAAATTTCTTCCATGGATGTAAAGAAGAAAAGAATTTTCAATTTGAGATCAAAACACATGGTGAGAAGACAGTCATGGACAAATTCACTCAAATTGAAGGTGGCTATAGGGCGTTTGTACTTTGTACAGAACCCGAACCCACTGATCCCCCCAATATTTGGCACGAATGAATTTGGCTGGTGTTGTGAACGGAATTCAGCCATGACAAAGATAACTGGATGGAAGAAAGATGATGCGATGGATAAAATATTTGAAAAATAA 597 0.4137 MLVNFWLKYLPSILLHTQTLLCNMLMRDAPFGIVSQSTNIIDLVRCDEATLLYRDKVWRLGVAPSESRIRELALWPSKCHKDSTGLSTDSLSNAGFPRVAALGDVVCGMVAVKISSMDVKKKRIFNLRSKHMVRRQSWTNSLKLKVAIGRLYFVQNPNPLIPPIFGTNEFGWCCERNSAMTKITGWKKDDAMDKIFEK* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0302 198 PANTHER TWO-COMPONENT HISTIDINE KINASE 154 195 - -
Amo06g0302 198 Gene3D - 14 155 IPR043150 -
Amo06g0302 198 SUPERFAMILY GAF domain-like 15 129 - -
Amo06g0302 198 Pfam Phytochrome region 16 131 IPR013515 GO:0006355|GO:0009584
Amo06g0302 198 PANTHER TWO-COMPONENT HISTIDINE KINASE 14 131 - -
Amo06g0302 198 Pfam PAS fold 160 195 IPR013767 GO:0006355
Amo06g0302 198 PANTHER PHYTOCHROME A 14 131 - -
Amo06g0302 198 PANTHER PHYTOCHROME A 154 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0302 Amo-Chr6 4421332 4422492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0302 153 196 Histidine Kinase Gene Family AT1G09570 63.636 6.61e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0302 K12120 - fve:101310811 155.992