Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0291 ATGGCCGTTACTGTTCATCTCCCTTCTGATTTTTCCCTCTACTTTTCTTTTTCTCAAATACCAAAAGTGGTTCAACGGTTGTGGCTTGTGGGAAGTTATTGGTGCCTGTGCTCAGGGGAGCAGTTGAGACGAGAAGGAGGCATGGATGAGATGGCAGTTCCTTCGTCATCGGATTCTCTTGCCACTAAGGACTATTATTCGGCCACGACTGGCAGCGGCCGTTCTGGACAGGATGGACAACTTCAAAGGAGGCTGGATGCAGGAAATATCGAAGAAGCTGAATCGTCTTTGCGTGAGGCCGGCTGCTTGAATTATGAGATACTGACTGATGTAGTTAGTGTTGAGCTACTTCCAGAATTATGGAAACTTGCTGATTGTCCACATGAAGTTATCATGGCTTACCGACAGGCTCTCCTACGAAAACTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTAATTTTAATTATTTTGCTAAGAAAAGTCTCTTTGAATGA 501 0.4451 MAVTVHLPSDFSLYFSFSQIPKVVQRLWLVGSYWCLCSGEQLRREGGMDEMAVPSSSDSLATKDYYSATTGSGRSGQDGQLQRRLDAGNIEEAESSLREAGCLNYEILTDVVSVELLPELWKLADCPHEVIMAYRQALLRKLICAQKQHRRGYTNFNYFAKKSLFE* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0291 166 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 113 142 - -
Amo06g0291 166 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 33 108 - -
Amo06g0291 166 PANTHER PROTEIN NPG1 113 142 IPR043376 -
Amo06g0291 166 PANTHER PROTEIN NPG1 33 108 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0291 Amo-Chr6 3909245 3911788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0291 35 106 Calmodulin-binding Proteins AT1G27460 45.833 1.38e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0291 K21843 - adu:107466701 128.257