Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0281 ATGCCTCATCAGGCATTTCTCAAGTTGAAACATGAGACAAAGTATGAGCACATCTTTGTTGTTGGAAATGCTGGCAAGAAATTCGAGATTGTTCTTGATTTTCTTGGCTTGGTGGAGAAATTTTACTATCTCTCTGGCAGATATGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTACGGCCACTTGGCCATCTTGAATTAGATCTTCCAGAAGCACCTACTAGCAAGGCACCCCGTCTTCCTCCACTAGCTGTTGATCCATACACGAGATATGGGCCCAAAGCGAGATAA 306 0.4379 MPHQAFLKLKHETKYEHIFVVGNAGKKFEIVLDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLRPLGHLELDLPEAPTSKAPRLPPLAVDPYTRYGPKAR* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0281 101 MobiDBLite consensus disorder prediction 77 101 - -
Amo06g0281 101 Pfam Oligosaccharyltransferase subunit Ribophorin II 2 100 IPR008814 GO:0006487|GO:0008250|GO:0016021
Amo06g0281 101 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 2 100 - -
Amo06g0281 101 PANTHER RIBOPHORIN II 2 100 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0281 Amo-Chr6 3818313 3822746 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0281 K12667 - qsu:112019243 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0281 06 3818313 3822746 Amo19g1642 19 40861488 40869182 PCT
Amo19g1642 19 40861488 40869182 Amo06g0281 06 3818313 3822746 PCT