Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0280 ACAAACGCAGCCTTAGTCCCTCCAACCACTAGCCTGCCTCCCGCTTTCAGTCTTGCCCGCTGCCTGCCAGACTGCCTCTCATCCCCTTTGCCGTCTCCTCACTACCTCCGGGGGCTTCGCCAGTCACGATTCGCCGGCTTCACCACCTCCTCTATCTGCGACTCCTCACTCAGCCTCTCCTCCTTCGTGGCTAGAACTTTAGCCTCCTCTTCATCGGCCCCACGCCTCCACGACGTCGCGCCGTCTCCGTCGAAGCCGCATCTGCCAGTCTCCGCCGTCTCCTCTGTCTCGCAAGTGCACACTGCACATGTCAGGAAAATGGTGTTTAACTTTTCTCTTTATTTCATGATTGTTGGGTTGAAAATTGTTTACATGATTGATTTTATTTTAGTTATGGCAACTGCAACATACCCGCCGCCCCCACCATATTATAGGCTCTACAAAGATTACTTGGAGGATCCTAAGTCTGCTCCAGAGCCTCCTCCTCCCATAGAAGGGACCTACATTTGTTTTGGGGGCACCTACACTGTAACTGGGTATCCACAAATATCCACCGTTAGTCAGACTAGTGATGTTTTGCCAAGCTTGGAAGAACAAGGGGTGCGCCAACTCTATCCAAAGGGGGCTAATGTTGATTTCAAGAAGGAGCTGAGATCACTGAATGGAGAATTGCAGCTACACATTTTGGAGCTTTATGCAAGGAGAGTTGAAGAGATTTCAACTGTATTCAAAAACTTACATCACCTTTTAAATTCCTTGCGACCTCATCAGGCAAGAGCAACATTAATTCATATTTTGGAACTTCAGATTGAGCGTCGTAAAGAAGCAGTGGAGGACATAAAGAAGAGAAGAGAAGAGGCACGAAGATTACTTAACGAGTCCCTAGCAACACTTGATGATCAATAG 906 0.4834 TNAALVPPTTSLPPAFSLARCLPDCLSSPLPSPHYLRGLRQSRFAGFTTSSICDSSLSLSSFVARTLASSSSAPRLHDVAPSPSKPHLPVSAVSSVSQVHTAHVRKMVFNFSLYFMIVGLKIVYMIDFILVMATATYPPPPPYYRLYKDYLEDPKSAPEPPPPIEGTYICFGGTYTVTGYPQISTVSQTSDVLPSLEEQGVRQLYPKGANVDFKKELRSLNGELQLHILELYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIERRKEAVEDIKKRREEARRLLNESLATLDDQ* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0280 301 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 133 301 IPR009244 GO:0003712|GO:0006357|GO:0016592
Amo06g0280 301 SUPERFAMILY Mediator hinge subcomplex-like 210 292 IPR037212 GO:0016592
Amo06g0280 301 Gene3D - 202 292 IPR044888 -
Amo06g0280 301 Coils Coil 263 297 - -
Amo06g0280 301 Pfam MED7 protein 135 291 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0280 Amo-Chr6 3808389 3816838 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Amo06g0280 Med7 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0280 K15148 - gmx:100792250 259.225