Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0256 ATGTGGTGGAGATCCGCATCATTCATACTAGACAGGCAGCAGAACGACGCGGCTCTGAGGCCGGACACATCGTCCACCGTTACTCCTCCTCCACCCACTGAATCCTCCTCCGCAATGGGATTGCCCACCGACCACAACCCTAACATCTCCGCCTACTACCAGACAAGGGCCGCCCACCACGCCGTCGTTACCAGCGACTGGCTCGCCCAGGCCCAGGCTGCCGCCGCCGTTGCCCACGACCCCCCTCAATCCACCTCCACCGCTGATCCCGACAAGCCCTTCAGCGTTATCGACGTCTTCAACAACTGGCGTAGACAGCCCGATTTGGCTGAGGCCGTCGCCGCCATTCGCGCCCTGGCCGCCGTCATCAGGTCCAGCCAGGCCTCCACCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGACTCTCTCAAAGCTTGGGATACGACTTCAATCTCCTTGACTGCTGGCTGTGATTTGTTTATGCGGTATGTGACGAGGACCTCTGCTTTGGAGTATGAAGATTTTAATTCAGCCAAGTCTCGCCTAATCGAGCGCGCTGAGAAGTTTGGCGAAATCTCCTACAAGTCCAGGAAAATTATTGCCATGTTGAGTCAAGAGTTTATATTTGATGGCTGTACCATTTTAGTCCATGGGTTTTCCAGGGTTGTCTTTGAAGTTCTAAAACTGGCAGCACAAAATAAAAAGCTATTTAGAGTCTTCTGCACAGAGGGAAGACCGGATCGAACAGGATTACGGTTGTCAAATGAGCTGGCAAAGCTTGACGTTCCTGTGAAACTTGTAATAGACTCTGCTGTTGCGTATACTATGGACGAGGTGGACATGGTTTTTGTGGGTGCAGATGGTGTTGTTGAAAGTGGCGGCATAATTAACATGATGGGGACATATCAAATCGCATTGGTTGCAAATAGTATGAATAAGCCAGTTTATGTTGCTGCTGAAAGCTATAAGTTTGCTCGTCTCTACCCTCTAGACCAGAAAGACTTGGCTCCTGCCTTGCGCCCTATTGATTTTGGTGTACCAATTCCATCCAAGGTTGAAGTTGAAAGGTCTGCCAGGGATTACACCCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCAGTTGTTAGTGATGAGCTGATCCAGTTATACTTATAG 1182 0.5025 MWWRSASFILDRQQNDAALRPDTSSTVTPPPPTESSSAMGLPTDHNPNISAYYQTRAAHHAVVTSDWLAQAQAAAAVAHDPPQSTSTADPDKPFSVIDVFNNWRRQPDLAEAVAAIRALAAVIRSSQASTMMQLEIELKKASDSLKAWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKSRKIIAMLSQEFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVANSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0256 393 Pfam Initiation factor 2 subunit family 107 381 IPR000649 GO:0044237
Amo06g0256 393 Gene3D - 196 393 IPR042529 -
Amo06g0256 393 Gene3D - 93 194 IPR042528 -
Amo06g0256 393 MobiDBLite consensus disorder prediction 14 42 - -
Amo06g0256 393 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 46 393 - -
Amo06g0256 393 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 46 393 - -
Amo06g0256 393 SUPERFAMILY NagB/RpiA/CoA transferase-like 108 392 IPR037171 -
Amo06g0256 393 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0256 Amo-Chr6 3519511 3521794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0256 1 393 Eukaryotic Initiation Factors Gene Family AT1G53880 79.293 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0256 K03239 - gmx:100808764 623.624