Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0250 ATGTCAGTGGAAGCAGATCGGATGGGCATAGAGGAAGAGACGGAGACGGTGGCCACCGCCGTGGAAACCAATAATAAGCTCAAAGACCGAAAGGTTTCTTGGGCTAAGCTCCGCCGCGTAGATTCTCTCAACTTAGAAGCTGGAAGAGTTTCTCTCAGCGACAGCCATGGCTCTAAGTTGAGTTGGAAAACAACGTTGAGTTTGGCATTTCAAAGTATAGGAATTGTTTACGGCGATATTGGAACATCTCCTCTGTATGTGTTTGAGAGTACTTTTACTGATGGAATAAAAAACAATGATGATATTCTTGGTGTGTTATCCCTCATCATCTACACCATTGTGCTCATTCCTATGCTTAAATACGTCTTCATTGTGTTATGGGCTAATGACAACGGCAACGGTGGAGCATTTGCATTGTATTCGCTGATATGCAGACACTTAAAGGTTAGTTTGGTTCCAAATCAACAACCAGAAGACAGAGAACTTTCTAACTATAAACTGGACACACCCTCTAACAAGTTAAAACGAGCCCAAAGACTGAAGCAGATGCTTGAGAACAGTCACACTGCTCGTATTCTTCTTTTGCTTGCAACCATAACAGGAACTTCCATGGTCATAGGAGACGGGATTCTTACTCCTTCAATTTCAGTCCTTTCTGCCGTAAGTGGAATCAGTACATCACTGGGTCAAGAAGCTGTAGTGGGGATCACTATAGTAATCTTAATTGGCCTGTTTTCGATGCAACGATTCGGTACGGATAAAGTGGGTTTCACGTTCGCACCAATTATCTTTGTGTGGTTTGCATTCATTGGTGGGATCGGTCTCTACAATTTGTTCAAATATGACATTGGAGTGTTACGGGCTTTTAATCCAAAATATATAGTCGATTACTTCAAACGCAACGGTAAAAAAGGATGGTTATCACTTGGTGGAGTATTTTTATGTATAACAGGATCTGAAGCTATGTTTGCAGACTTGGGTCATTTTAATGTACGAGCAATCCAAATGAGCTTCTCTTTCATTACATGTCCTGCAATATTGGCTGCATATATTGGACAAGCAGCATTTCTACGGAAGTTCCCTGGAAAAGTACAGAATACTTTCTACGCAAGTCTACCACACTCCATATATTGGCCAACATTTGTGGTAGCTGTTGGTGCTGCAATCATAGCAAGCCAAGCAATGATTTCAGGAGCATTTTCCATTATATCGCAGGCTCTAAGTCTAGGTTGTTTCCCACGAGTTAAGGTCGTGCATACTTCCATTAAGCACCAGGGTCAAGTGTATATTCCAGAGATCAACTATATGTTCATGATTGCATGCATTATTGTTTGTGCTGCCTTCAAGACTACAGAAAAGATTAGTCACGCATACGGGATTGCCGTTATCGGGGATATGATGATCACAACAACTTTGGTTTCGTTGATAATGTTGGTTATATGGAAGAAGAGCATATGGCAAGTTGCTATCTTCTTCTTGGTATTCGGTTGCACAGAAGCTTTGTATTTCTCATCTCAGATAACCAAATTCACGGGTGGAGGTTTTCTTCCAATTGCTTCTGCTTTGTTCATAACAACATTAATGGGAATCTGGCATTACGTGCACAAAGAGAGATACATGTTTGAACTCAGAAACAAGGTTTCCAGTGAGTACATAAGAGAATTGGCCGTCAACCCAGACATAAGCCGAGTTCCGGGAATGGGGCTTCTCTACTCTGAGCTTGTTCAAGGGATTCCTCCGATATTCCCTCATCTCATTGCCAGTGTGTCATCCATCCATTCAATCCTTGTCTTCGTTTCCATCAAGGCCATCCCTGTCAGCCGAGTTGCTTTGGAGGAGAGGTTCTTATTTCGCCATGTCGAGCCTAGAGAGTACCGAATGTTCCGGTGTGTGGTGAGGCACGGTTACAAGGATGGACTTGAAGATCCTATGGAGTTTGAATCCCAATTAATACAAAATCTTAAGGCCTTCATTCAACAAGAAAGTTTTATGCTTACTGAGGGGGCTGATGTAGCAGAAAGTAGTGATCAGATGGCACTCAAGGAAGCAGAAGCACAAGTATTGCACGAAGGAACTAAAGTAAGGTCTGCTAATTCTTCCAGCAGAATAATTCCAAACAATAATAACCAAGGCATTGTGTCTCGTGCCTCCTCGGATCCCATCGTTCATGTGGCACCTAACAAGTRGTCCACTTTCTCTGATCCYCCCATCCAGGGTGCTGAAGATGAGGTCAAGTTCATAGACAAGGCAATGGAAAAGGGTGTGGTGTATATGTTAGGCGAAGCAGAGGTGGTGGCTCAACCAAATTCATCTTTTCTCAATAAAATAGTTGTCAACTATGCTTACAGCTTCTTGAGAAAGAACTTCCGCCAAGGAGACAAGTTGATGGCAATTCCTCGCAAGAGACTTCTCAAGATTGGAATGACATACGAAATATAA 2439 0.4239 MSVEADRMGIEEETETVATAVETNNKLKDRKVSWAKLRRVDSLNLEAGRVSLSDSHGSKLSWKTTLSLAFQSIGIVYGDIGTSPLYVFESTFTDGIKNNDDILGVLSLIIYTIVLIPMLKYVFIVLWANDNGNGGAFALYSLICRHLKVSLVPNQQPEDRELSNYKLDTPSNKLKRAQRLKQMLENSHTARILLLLATITGTSMVIGDGILTPSISVLSAVSGISTSLGQEAVVGITIVILIGLFSMQRFGTDKVGFTFAPIIFVWFAFIGGIGLYNLFKYDIGVLRAFNPKYIVDYFKRNGKKGWLSLGGVFLCITGSEAMFADLGHFNVRAIQMSFSFITCPAILAAYIGQAAFLRKFPGKVQNTFYASLPHSIYWPTFVVAVGAAIIASQAMISGAFSIISQALSLGCFPRVKVVHTSIKHQGQVYIPEINYMFMIACIIVCAAFKTTEKISHAYGIAVIGDMMITTTLVSLIMLVIWKKSIWQVAIFFLVFGCTEALYFSSQITKFTGGGFLPIASALFITTLMGIWHYVHKERYMFELRNKVSSEYIRELAVNPDISRVPGMGLLYSELVQGIPPIFPHLIASVSSIHSILVFVSIKAIPVSRVALEERFLFRHVEPREYRMFRCVVRHGYKDGLEDPMEFESQLIQNLKAFIQQESFMLTEGADVAESSDQMALKEAEAQVLHEGTKVRSANSSSRIIPNNNNQGIVSRASSDPIVHVAPNKXSTFSDPPIQGAEDEVKFIDKAMEKGVVYMLGEAEVVAQPNSSFLNKIVVNYAYSFLRKNFRQGDKLMAIPRKRLLKIGMTYEI* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0250 812 PANTHER POTASSIUM TRANSPORTER 5 26 811 - -
Amo06g0250 812 Coils Coil 10 30 - -
Amo06g0250 812 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 26 811 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo06g0250 812 Pfam K+ potassium transporter 69 638 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo06g0250 812 TIGRFAM kup: potassium uptake protein 68 812 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0250 Amo-Chr6 3451314 3458189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0250 24 812 Inorganic Solute Cotransporters AT4G13420 58.935 0.0 963
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0250 K03549 - gmx:100814313 1206.82