Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0229 ATGGCAACTCGCTATCTCAGATTGGCCCTCCTATCTTTCGAGATAAGAGCCTCCCTCCATATTCCACATTGCATACACACTCCAATCATGGCTTCCGCTTATGCTTCCTCTGCCATTGCAGCTGTTGGCATCTCTAGTCCAAACACAAAAGCTTCATTCCTAAGCACAGGCGTTAGAGGAGTATCGAGCACAAGAGTATGTGCAGCAGCGGCTGACCCTGAGAGACCCCTGTGGTTCCCGGAAGCACGCCTCCTCCATGGCTTGATGGCACCTCCTGGAGACTTTGGGTTTGATCCACTTGGTCTGGGGTCTGATCCTGAGAGCCTGAGATGGAATGTGCAGGCAGAGCTGGTGCACTGCAGGTGGGCAATGCTGGGTGCTGCGGGCATCTTCATTCCTGAATTCCTAACAAAGATTGGCGTGCTCAACACGCCATCGTGGTACACAGCTGGAGAACAGGAGTACTTCACGGACACAACCACGCTCTTCATAGTTGAGCTCATCTTCATTGGATGGGCAGAGGGAAGGAGGTGGGCTGACATCATCAAGCCAGGCTGTGTCAATACCGACCCCATTTTCCCAAACAACAAGCTCACTGGCACCGATGTTGGTTACCCCGGTGGCCTCTGGTTTGACCCTCTCGGATGGGGCACTGGCTCTCCTGAAAAGATCAAGGAATTGAGAACTAAGGAGATCAAGAATGGCAGGCTCGCCATGTTGGCTGTCATGGGTGCTTGGTTCCAGCACATCTACACCGGCACTGGTCCCATTGACAACCTCTTTGCCCACCTTGCTGATCCCGGCCATGCTACCATTTTTGCTGCTTTCACCCCCAAGTGA 840 0.5321 MATRYLRLALLSFEIRASLHIPHCIHTPIMASAYASSAIAAVGISSPNTKASFLSTGVRGVSSTRVCAAAADPERPLWFPEARLLHGLMAPPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0229 279 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 30 279 - -
Amo06g0229 279 Pfam Chlorophyll A-B binding protein 92 249 IPR022796 -
Amo06g0229 279 SUPERFAMILY Chlorophyll a-b binding protein 90 277 - -
Amo06g0229 279 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 30 279 IPR001344 GO:0009765|GO:0016020
Amo06g0229 279 Gene3D Chlorophyll a/b binding protein domain 84 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0229 Amo-Chr6 3271124 3272084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0229 66 279 Chloroplast and Mitochondria Gene Families AT3G61470 86.636 6.47e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0229 K08908 - gmx:100784089 429.869