Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0227 ATGGAAGAAGAAGTGAAAGGATATTCCGATAGCAGAGAAGAGGAGGAGGAGGAGGAGGAAGACGAAGCAGCGGAAATCATCCCAATTCCAAACACAAGACAAGAAACCAACAGCAGCGGAAACAGGTTACAGCAGCAGCAAGATACAGCAGTAGCTCCCAATTTCAGTCAGCGGAAGCAGCTAGATTTGATGGAGTTGTCACTAGGGAGCGGGAGCAGCAAGGACGATCGGAATTGGCAGCAAGGAGGAGGAGGAGGAGGAGGAATGGTTGGTTCTTGCTCATCATCATCATCGGAGGCGGTGGAGAAAGAGCACATGTTCGACAAAGTGGTGACCCCAAGCGACGTAGGGAAGCTGAACAGGCTAGTGATACCGAAGCAGCACGCGGAGAAGTACTTTCCATTGGACTCATCCTCCAACGAAAGGGGCTTCTCCTCAACTTCGAGGACAGGAACGGCAAGCTGTGGCGCTTCAGATACTCCTACTGGAACAGCAGCCAGAGCTATGTATGACCAAAGGCTGGAGCCGCTTCGTTAA 537 0.5177 MEEEVKGYSDSREEEEEEEEDEAAEIIPIPNTRQETNSSGNRLQQQQDTAVAPNFSQRKQLDLMELSLGSGSSKDDRNWQQGGGGGGGMVGSCSSSSSEAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNERGFSSTSRTGTASCGASDTPTGTAARAMYDQRLEPLR* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0227 178 MobiDBLite consensus disorder prediction 134 178 - -
Amo06g0227 178 Gene3D - 100 152 IPR015300 -
Amo06g0227 178 CDD B3_DNA 105 138 IPR003340 GO:0003677
Amo06g0227 178 MobiDBLite consensus disorder prediction 30 79 - -
Amo06g0227 178 MobiDBLite consensus disorder prediction 1 101 - -
Amo06g0227 178 MobiDBLite consensus disorder prediction 9 25 - -
Amo06g0227 178 MobiDBLite consensus disorder prediction 138 161 - -
Amo06g0227 178 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0581400 12 144 - -
Amo06g0227 178 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 12 144 IPR044800 GO:0003700
Amo06g0227 178 SUPERFAMILY DNA-binding pseudobarrel domain 104 138 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0227 Amo-Chr6 3257950 3258576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0227 99 144 RAV Transcription Factor Family AT2G46870 82.609 6.64e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0227 - - gmx:100812161 115.931