Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0222 ATGGATTTCGGAGGAGGAGGAGGGACCCGGGTGATCGGAGATTACATACTTGGACCTAAAATCGGGTCGGGTTCCTTCGCGGTAGTGTGGCGTTCAAGGCACCGCAAATCCGGCACGGTGGTGGCTGTTAAGGAGATCGATAAGAAGCAGCTGAGCCCCAAAGTGAGTGAGAATCTGTTTAAAGAGATTACTATTCTCAGCACAATCGATCATCCCAACATCATTCGACTCTTCGAAGCTATTCAGACCAAGGACAGGATTTACCTTGTGTTGGAGTATTGTAGTGGTGGCGACCTTGCAGCTTACATTCATCGCCATGGCAAAGTTTCTGAAGCCACTGCCAGGCACTTCATGATCCAATTGGCTGCGGGGTTGCAGGTTCTTCAAGAGAAGAACCTCATTCACAGAGATTTGAAACCACAGAACTTACTATTGGCAACTTCTGGAGCTACACCACTCATGAAAATAGGAGATTTTGGTTTTGCAAGGTCTCTCACACCCCAGGGTTTGGCTGACACTCTGTGTGGTTCACCATTATACATGGCTCCAGAGATAATTCAAAATAAAAAATATGATGCCAAGGTGATGAAAGCTGATTTATGGAGTGTAGGGGCAATATTGTTCCAACTAGTAACTGGAAAGCCACCATTTGATGGAAATAGTCAACTGCAGCTTTTTCAAAACATTTTGACATCTACCGAGCCGCAGTTTCCCCAAGAGGCTTTAAAAGAGCTACATTCTGATTGCTTGGATCTTTGCAAAGGCCTTTTACGTCGAAATCCAGTTGAGCGATTAACTTTCAAGGAGTTCTTCAATCACAATTTCCTTCAGGAACCCAGGTTAATCATGCATGTTGAGCAGTCTTTATTGCATCCATCAGAGAGATCCGTGGTTCAACACTTAGTTACCTCCACTTCGGACATGTCTCAGTTGCATTCTGGGCATCATGTTGAGTCATTAGTAGATGATCCAGTTGTAGTCAATTCAGTTCTCAATGATACTTTGGCACTGCAAAGAAATACTGGGAAGAAAACAATTGGCATTCAGGCTGTTGAGACACCTGTTTTTGGTTGTTCTCATTTGTCAAAAGAACCTCAAGTTTCTCGTTTAATGGAGTCCATTGAAAAAGATTATGTCCTAGTCAATCATCATTTTGCATCATTGGAAGCTTTCTCTGAGTACTTTGAGGCATCTGTGCAAGATAATTCCACTTGCAAGGTTTCTATTTGCTCTTCAAAGAGGACTAACACGGAAACTGGTGTTCCAATGCAAACAAACGATCCATCCCATTGCCATGCTGGTGAATTAGAAAATCCAAAAAGTGGCGAACCTGTGGCATTAGCGGCATCCCGTGCATTTGATGTCTTAAGTAAAATGCATGGAACTTCCTCGCTGAGCTCTTCAAACAGGCTAGAGTTATTGCATCTGTATGTGCAGATCCTTGCGGAGCTTTCATGTGAAAAATACAATGCAAAATTGTATCTGGAATCGTTTGCAGTTGAGTTAGTAGTTTTGGCTATATGGAAGAAAGCTCTAGAAGTTTGTGAATCTTGGATGAATATGGGTGTGTTGCCTGCAAGCACTTTGGCCAATGAAGCCAGAACTTCCTATGGAGATGTGGGTTCATCACAGAACATGGAAAAGAAAATAAATTTCTGTGATCCTTTGTCAGTCTACATGTGGGCAAAAGAGGGGTTTATTGCTGCAGTTGATAGTGCTCAGACACTGTCACGTCATATTCAAAATATGGATGGAGAAGCTGAGATGCCAGATGCAATGGAGATCATATTCCAAGAAGCACTCCTAGTTGGTAAAAGTGGTGCTGTAGATGAATATATGGAGAACAGAGGTAGGGCAGCTGCATCTTATTCAAAAGCTATGCTTCTGCTTTCCTTTATTGTGGGGGAAGCAACGAACCTTCCATTAAACCCGCCATTTTTGCTTACTGCTGCTAACGAGAAGCGAATCCTACAATATATTCACAACTTGCAATTCCATCAAAAATCTTCATCAGACTCTTCTCCCAAAGCAACCCATATTCTTTTGTCTGAGTAA 2055 0.4263 MDFGGGGGTRVIGDYILGPKIGSGSFAVVWRSRHRKSGTVVAVKEIDKKQLSPKVSENLFKEITILSTIDHPNIIRLFEAIQTKDRIYLVLEYCSGGDLAAYIHRHGKVSEATARHFMIQLAAGLQVLQEKNLIHRDLKPQNLLLATSGATPLMKIGDFGFARSLTPQGLADTLCGSPLYMAPEIIQNKKYDAKVMKADLWSVGAILFQLVTGKPPFDGNSQLQLFQNILTSTEPQFPQEALKELHSDCLDLCKGLLRRNPVERLTFKEFFNHNFLQEPRLIMHVEQSLLHPSERSVVQHLVTSTSDMSQLHSGHHVESLVDDPVVVNSVLNDTLALQRNTGKKTIGIQAVETPVFGCSHLSKEPQVSRLMESIEKDYVLVNHHFASLEAFSEYFEASVQDNSTCKVSICSSKRTNTETGVPMQTNDPSHCHAGELENPKSGEPVALAASRAFDVLSKMHGTSSLSSSNRLELLHLYVQILAELSCEKYNAKLYLESFAVELVVLAIWKKALEVCESWMNMGVLPASTLANEARTSYGDVGSSQNMEKKINFCDPLSVYMWAKEGFIAAVDSAQTLSRHIQNMDGEAEMPDAMEIIFQEALLVGKSGAVDEYMENRGRAAASYSKAMLLLSFIVGEATNLPLNPPFLLTAANEKRILQYIHNLQFHQKSSSDSSPKATHILLSE* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0222 684 Gene3D Transferase(Phosphotransferase) domain 1 8 349 - -
Amo06g0222 684 PANTHER BNAC06G18300D PROTEIN 467 660 - -
Amo06g0222 684 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0222 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Amo06g0222 684 Pfam Protein kinase domain 18 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0222 684 CDD STKc_ATG1_ULK_like 21 275 - -
Amo06g0222 684 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Amo06g0222 684 PANTHER BNAC06G18300D PROTEIN 9 310 - -
Amo06g0222 684 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 9 310 IPR045269 GO:0004674|GO:0006914
Amo06g0222 684 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0222 684 SUPERFAMILY Protein kinase-like (PK-like) 11 318 IPR011009 -
Amo06g0222 684 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 467 660 IPR045269 GO:0004674|GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0222 Amo-Chr6 3166660 3170420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0222 5 282 CBL-interacting serine-threonine protein kinases AT2G30360 36.014 4.30e-52 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Amo06g0222 Pkinase 4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0222 - K08269 gmx:100782508 859.366