Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0221 ATGGATGCATACTCCTCTGGAGAAGAAGTGGTTGTTAAGACAAGAAAACCATATACAATTACGAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAATCGGTTCCTAGAAGCCCTAAAGCTATATGGGCGAGCATGGCAGCGGATAGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTTCAAAGTTGGAGAAAGAGGCCCTTGTAAAGGGTGTTCCGTTAGGACAGGCTATTGATATAGACATCCCACCACCAAGGCCCAAAAGAAAACCAAGCAATCCTTATCCCCGTAAGACCAATGTTGGCACCCCAACCTCACATAGTGGAGCAAAATATGGAAAGCTTTTCATTTCAGTTGCATCTTCACATTGTAAACAAACACTGGACTTGGAGAAAGAACCTCTACCAGAGAAGCATAATGAAGATGAAAGGCCAACTTATGCAAACGAGAATAAGAGTGAAGGCTGCTCAAAAGTGTTTGCTGTTCTTGAGGAGGCACCCAGTTTGTCCCCATCTTCAGCAGACAAGAATTTAATACCAATGTCAGTGCCAATGCAAAATTCATGTGCCTTGAGGGAGTATATACCTTTAGTGAAAGATGTAATAGCTGAAGATGAAGGAAATAAATCTTTTGTTACTGTTGAACTTGAAAATCAGAAGTTGGGGATAGATGATGGTAAGTGCACGCAAACCAATGGCATTTGTAAAGCCTCTAAGATGGACATTTATTGTGCTTCTAAAGCCAAAATGGTTCATACTGAGAAAGCAGATGGAATTCAAGGCAGTCAGAATTACCCAAGGCATGTTACTGTGCATGTCATTGATGGGAATCATGGAACTGCTACACAAAATCCATCCCATGATACATTGTTTCGAGACTCCGTAATTCCGCAAGGAGGGGTTAATGGGCAACCAAATCATTTTACCAATCCAGCTGCATCAAACACAAGTGAAAGTCAAAATGACACAGCACGATCCTCTATTCATCAAACATTTCCCCCATGTCCTCCTTTCATGCAGCATAATCAAGAAGATTACCAATCATTTCTTCACATGTCATCCACATTTTCAAGTCTTATTGTTTCCACATTGATGCAAAACCCTGCCGCCCATGCTGCAGCAAGTTTTGCTGCAATGATTTGGCCCTGTGCAAGTGCAGAGACACCAGCAAATTCTCATTCGTGCTCTCAAGGAAGCTTTCCATCTAGCCATATTGGTTCTCCTCCAAGTGTGGCGGCTATAGCAGCTGCGACTGTAGCTGCTGCAACTGCGTGGTGGGCTGCCCATGGGCTGCTTCCTTTGTGTGCCCCACTTCATACTGCCTTTGCCTGTCCACCTTCATCAGCAACTGCAGCTCCCTTGATCAATACTGGCGAGGCATCACCCAAGACAGAGCAAGGAAACGTTGCTCCAGAAAATCCTCTGCAAGATCAGACAGCTGATCCAGAATATTCAGAAGCTCTTCATGCTCAAGATTCATCTTCTAAGTCACCAGCTGTTTCTTCATCCGAATATGAAGAGATTGGAGATGCCCAATTAAACGCTTCAACCAACGCTACTACTGATCATGGGAAGAACCAAGAAGTTTCTGAACACCTTGACCCTGACAAAGTGAATGGCAGCAAACAAGTTGACCGCTCCTCATGTGGTTCCAACTCAGCCTCTAGCAGTGAAGAAACAGATGCACTAGAGAAGGAAGAAAAAGAAAAGGAAGAGTCCAAAACACATGATGCAAACCATGTAGATACTGAGCCAATTAATCGTCGTTGTAGAAGCATTAGCTACCTTACGGATTCTTGGAAGGAGGTCTCCGAAGAGGGACGGCTGGCCTTCCAGGCTCTATTCTCCAGAGAAGTGTTACCTCAAAGTTTTTCACCTCCGCATGATTTGATAAACAAGGATCATCAGATGGGCAATATCAAACATGACAATCAGCAGGTTGAGTGCAAAGATGAAGAGGATCTTGACAGTAAGAAATGCAGTTCTCAGTGTGAAGGGGTGCAAAAAAACCTGCAATTTGAAGAAAATAAGAAAGAAGAGGAGGGACTGCTGGCCATAGGTCTTGGACAAGGTAAGCTCAAGACTCGTCGAACAGGGTTTAAACCTTACAAAAGATGTTCAGTAGATGCCAAGGAAACAAGGATTGGAATGGCCTGTAACCATGGTGAAGAGAAGGGTCCCAAGAGAATACGCCTGGAAGGGGAGGCTTCAACATGA 2244 0.4407 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPLGQAIDIDIPPPRPKRKPSNPYPRKTNVGTPTSHSGAKYGKLFISVASSHCKQTLDLEKEPLPEKHNEDERPTYANENKSEGCSKVFAVLEEAPSLSPSSADKNLIPMSVPMQNSCALREYIPLVKDVIAEDEGNKSFVTVELENQKLGIDDGKCTQTNGICKASKMDIYCASKAKMVHTEKADGIQGSQNYPRHVTVHVIDGNHGTATQNPSHDTLFRDSVIPQGGVNGQPNHFTNPAASNTSESQNDTARSSIHQTFPPCPPFMQHNQEDYQSFLHMSSTFSSLIVSTLMQNPAAHAAASFAAMIWPCASAETPANSHSCSQGSFPSSHIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPSSATAAPLINTGEASPKTEQGNVAPENPLQDQTADPEYSEALHAQDSSSKSPAVSSSEYEEIGDAQLNASTNATTDHGKNQEVSEHLDPDKVNGSKQVDRSSCGSNSASSSEETDALEKEEKEKEESKTHDANHVDTEPINRRCRSISYLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDLINKDHQMGNIKHDNQQVECKDEEDLDSKKCSSQCEGVQKNLQFEENKKEEEGLLAIGLGQGKLKTRRTGFKPYKRCSVDAKETRIGMACNHGEEKGPKRIRLEGEAST* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0221 747 MobiDBLite consensus disorder prediction 139 159 - -
Amo06g0221 747 Gene3D - 26 73 - -
Amo06g0221 747 PANTHER PROTEIN LHY 2 728 - -
Amo06g0221 747 SMART sant 23 71 IPR001005 -
Amo06g0221 747 MobiDBLite consensus disorder prediction 551 567 - -
Amo06g0221 747 MobiDBLite consensus disorder prediction 534 550 - -
Amo06g0221 747 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Amo06g0221 747 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Amo06g0221 747 MobiDBLite consensus disorder prediction 310 339 - -
Amo06g0221 747 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Amo06g0221 747 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Amo06g0221 747 MobiDBLite consensus disorder prediction 86 116 - -
Amo06g0221 747 MobiDBLite consensus disorder prediction 568 596 - -
Amo06g0221 747 PANTHER SWI/SNF COMPLEX-RELATED 2 728 - -
Amo06g0221 747 MobiDBLite consensus disorder prediction 497 533 - -
Amo06g0221 747 MobiDBLite consensus disorder prediction 139 158 - -
Amo06g0221 747 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Amo06g0221 747 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Amo06g0221 747 MobiDBLite consensus disorder prediction 463 597 - -
Amo06g0221 747 CDD SANT 26 69 IPR001005 -
Amo06g0221 747 MobiDBLite consensus disorder prediction 463 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0221 Amo-Chr6 3158011 3166072 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo06g0221 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0221 K12133 - gmx:780540 958.747