Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0185 ATGAATTGCTTTCCGTGCTTCACTTCTCAAAAAAGCAAGAAAAGCAGTAGCAGCAAGGATTTTTCTCCTCCTCCACAGGAACAGGAACAAGTTGTAGCAAGACCACCAGATATAAAGAAACCAAAGGCAGAAGACATAAACCAAGTAGACACATCGAATATTAAAGCACACAATTTCACATTCCGTGAGCTAGCAACTGCAACAAAGAATTTCCGGCAAGAAATGTTGATGGGTGAAGGTGGCTTTGGCAGAGTCTACAAGGGCACAATCCCTGCAACCGGCCAGGTGGTAGCAGTGAAGCAACTGGACCGAAATGGAATGCAAGGAGGAAGCAAGGAATTTCTGGTTGAGGTTTTGACTCTAAGCCTCATGAGCCATGAGAATCTCGTCAAACTCACTGGTTATTGTGCCGATGGTGATCAACGTCTTTTGGTGTATGAATTCATGCCTGCTGGCTCTCTAGAAAAGCGSCTTCTCGAGCGGGGACCGGAGCAACCTCCATTAGATTGGTACGTGAGAATGAAGATAGCATCTGATGCGGCAAAAGGACTATGGTACTTGCACGACATGGCGAATCCCCCTGTCATATTCAGGGACTTGAAATCCTCCAACATCTTGCTGGACAATGATAACAATGCAAAGCTATCCGATTACGGACTTGCAAAACTTGCTGGTAAAGATAAGATGAATATTGTTCCTACCAGAGTTATGGGCACCTATGGTTTTAGTGCCCCTGAATACGTAAGAACAGGTCAACTCACCTTGAAGTCAGATGTCTATAGTTTCGGTGTTGTCTTGCTAGAGCTCATCACTGGACGCCGCGCAGTTGACACCACTAGACCCAACGACGAGCAAAATTTAGTTTCATGGGCGCAACCCATATTTAGAGACCCGAAAAAGTATCCAGAAATGGCAGATCCACTTCTGAAAGGCAAGTTTCCAGAGAAGGATCTGAATCAAGTTGTTGCAATAGCAGCCATGTGCCTACAGGAGGAATCAGCAGCGCGTCCTCTCATGAGTGATGTGGTGACTGCCCTCAGTTTTCTCTCAACAACTCCGCCTCCGGAGGCCAATCCTCAGCCTGAGCCTGAGCTTGATCCCGAGCCTGAGCCAGAGCCTGAGCCTGAGCCTGAGCCAGAGCCTGAGCCTAAGCCTATCCCTGCCCCTGCCCCTGCCCCTCTTTCTGCTGCGCGCTCGGCCAAGAGTGAAGCATCCGCAAGTGTGAGTGGCAGCGGCAGTGACAGCGCAAGTGATAGTGGAAGCTACAGCCAGAGCCAGAGCGATTATGATGGATCTGATGGTGAATCAGACTACTATGAAGAGGATGAAGATAAACGAAGCTACAGCCCACAAGATAGTATACAATCTAGGGAATTCTACTCCAAGTCAAGCCGCAAAAGCAGCACCAGATCATCGTCCAGGGCTCACAGCGATGTAACTTCGAATTCCGAAGATGAAAGGAGAGGACCATCCCCACGCAAAGCCAGTAGGAAACATTTAAGCCAGAAGATTAGCAAGAAGTCTTCCAGCAAGGAAAAAGAATTAGGCCAGAATAGCAGTAAGAAAGCTGCTTCTCGGAAGAACAGAGAATTAAAGCAGAAGAGTAGCAGAAACAAAGATAGAGAATTTAGCCAAAAGAGCAGTAAGAAAAAACCATCATCTTCTTCAAAGAGGAGAACCGGGGTGGGACCAGAGGAGTCAAAGTCAAGGGATGAAGGTGAAGCCATGCTTAGTGAGAGATCATCACGAGAGGATATATCTTACGGTCACGACAACCAAGAGAGTAGTGAGAGCATCCCATTCGAGTATGAACGCAGCAAGGAACCATCAGCTATCCCGCCATTGCCACCAACAGCAAGCACTCTCACATAA 1872 0.476 MNCFPCFTSQKSKKSSSSKDFSPPPQEQEQVVARPPDIKKPKAEDINQVDTSNIKAHNFTFRELATATKNFRQEMLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGMQGGSKEFLVEVLTLSLMSHENLVKLTGYCADGDQRLLVYEFMPAGSLEKRLLERGPEQPPLDWYVRMKIASDAAKGLWYLHDMANPPVIFRDLKSSNILLDNDNNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGFSAPEYVRTGQLTLKSDVYSFGVVLLELITGRRAVDTTRPNDEQNLVSWAQPIFRDPKKYPEMADPLLKGKFPEKDLNQVVAIAAMCLQEESAARPLMSDVVTALSFLSTTPPPEANPQPEPELDPEPEPEPEPEPEPEPEPKPIPAPAPAPLSAARSAKSEASASVSGSGSDSASDSGSYSQSQSDYDGSDGESDYYEEDEDKRSYSPQDSIQSREFYSKSSRKSSTRSSSRAHSDVTSNSEDERRGPSPRKASRKHLSQKISKKSSSKEKELGQNSSKKAASRKNRELKQKSSRNKDREFSQKSSKKKPSSSSKRRTGVGPEESKSRDEGEAMLSERSSREDISYGHDNQESSESIPFEYERSKEPSAIPPLPPTASTLT* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0185 623 MobiDBLite consensus disorder prediction 400 432 - -
Amo06g0185 623 SUPERFAMILY Protein kinase-like (PK-like) 57 370 IPR011009 -
Amo06g0185 623 MobiDBLite consensus disorder prediction 452 478 - -
Amo06g0185 623 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 564 - -
Amo06g0185 623 SMART serkin_6 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0185 623 MobiDBLite consensus disorder prediction 1 25 - -
Amo06g0185 623 MobiDBLite consensus disorder prediction 505 548 - -
Amo06g0185 623 MobiDBLite consensus disorder prediction 363 377 - -
Amo06g0185 623 PANTHER OS07G0668900 PROTEIN 1 564 - -
Amo06g0185 623 Gene3D Transferase(Phosphotransferase) domain 1 149 355 - -
Amo06g0185 623 CDD STKc_IRAK 77 346 - -
Amo06g0185 623 MobiDBLite consensus disorder prediction 349 623 - -
Amo06g0185 623 MobiDBLite consensus disorder prediction 561 604 - -
Amo06g0185 623 ProSiteProfiles Protein kinase domain profile. 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0185 623 Pfam Protein kinase domain 72 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0185 623 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
Amo06g0185 623 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0185 Amo-Chr6 2866421 2868667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0185 1 378 Glycoside Hydrolase AT3G07070 61.082 4.21e-164 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Amo06g0185 Pkinase 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0185 - - ahf:112695353 770.77