Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0167 ATGGTGTACCTCAATTTCTCTTACAGGGCTGAATCCGCAGTTTCAACCTCCAATTCTCTCACACCATCACCTTCTTTTTCTTCTTCTTCCACCGCCACCACTTCAAAAAAACAGAACAACAAAGAAAAAGAAAAACCCATCAAAATCCAACACTTCCATTACAGTGACCTTGAAGCTGCCACCAATGGCTTCTCAGAGCGCAAGCTCCTCGGCAAAGGAAGCCATGGTTATGTCTATAAAGCTGTAATGGTTTCTTCTTCTTCCTTTGCATCTGCACCAGAGTTCATCATCAGCAACAACAAGGTTGATAACGAGATTGATATCTTATCCAAAATCCAGAGCAATAACAGCAAGCTTTCAAATTGGGGAAGAAGGGTTCGTTTGGCATTGAAAACTGCAAAGGAAATTGATACCCTTCATTCGTCAACACCACTTGTGATCCATAGAGATATTAAATCAACAAATGTTCTGATTGATAGAAACTTCAATGCAAGGTTAGATACAACCTCTGTCCCCACATTTCTTTTCCTTCTACTTCGTCTAGCCAAACCACAAGGATCTGTCTGA 567 0.4092 MVYLNFSYRAESAVSTSNSLTPSPSFSSSSTATTSKKQNNKEKEKPIKIQHFHYSDLEAATNGFSERKLLGKGSHGYVYKAVMVSSSSFASAPEFIISNNKVDNEIDILSKIQSNNSKLSNWGRRVRLALKTAKEIDTLHSSTPLVIHRDIKSTNVLIDRNFNARLDTTSVPTFLFLLLRLAKPQGSV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0167 188 SUPERFAMILY Protein kinase-like (PK-like) 49 166 IPR011009 -
Amo06g0167 188 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 1 114 - -
Amo06g0167 188 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 116 166 - -
Amo06g0167 188 Gene3D Phosphorylase Kinase; domain 1 25 113 - -
Amo06g0167 188 Pfam Protein tyrosine and serine/threonine kinase 30 163 IPR001245 GO:0004672|GO:0006468
Amo06g0167 188 PANTHER OS01G0750732 PROTEIN 1 114 - -
Amo06g0167 188 PANTHER OS01G0750732 PROTEIN 116 166 - -
Amo06g0167 188 Gene3D Transferase(Phosphotransferase) domain 1 114 167 - -
Amo06g0167 188 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0167 188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Amo06g0167 188 MobiDBLite consensus disorder prediction 16 46 - -
Amo06g0167 188 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0167 Amo-Chr6 2587091 2587844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0167 27 166 Receptor kinase-like Gene Family AT3G59420 30.526 1.45e-16 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Amo06g0167 PK_Tyr_Ser-Thr 8.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0167 - - adu:107462289 276.944