Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0158 ATGGAACCTAATGACAACCAACTCAGCTCCTACTTCCACCAACAACAACAACAGCACCACCACCAGCAACAGCATCACCACCAGCAGCACCACCAGAGCGCCGCCGCGCCCTCCGGCGTGGGAGCCWCGACGGCGGTMTCGCCGACCAACGGCCTTTTAGGGAACACCGATGGGGCCCACTCGCACATGTTGTACCCTCACACGGTGCCGTCGGCYGTGTCGTCGCAGCTGGTGGAGCCACCGGCGAAGAGGAAGAGAGGTCGGCCTCGCAAGTACGGTACTCCCGAGCAAGCCCTCGCTGCGAAGAAAGCCTCTACGACGTCATCTTCCGCCGCTCACTCCTTCTCCCCAACCTCCTCRTCCTCCGCRGCAAAGAAATCCCTTCCTCACCAGCCTCGTGCCTTGGGTGGTTCCTCGTTTCCTTCCTCCTCTTCCAAGAAATCGCACTCCTTTGGTTTAGGCAATGCAGGACAAGGCTTCACTCCGCATGTCATTGCTGTAGCTGCTGGTGAGGATGTTGGCCAAAAAATTATGTTATTTATGCAACAAAGTAAGCGTGAGATGTGCATTTTGTCTGCATCTGGTTCCATATCCAATGCCTCTCTTCGTCAGCCAGCAACCTCAGGAGGCAACGTTACATATGAGGGTCGGTTTGATATTATTTCTCTTACTGGTTCCTATGTTCGTAATGAACTTGGAAATCGATCTGGTGGTCTGAGTGTATGCTTATCTAATACTMATGGGCAAATAATTGGTGGTGGAGTTGGTGGACCCCTTAAAGCGGCTGGTCCAGTTCAGGTTATTGTCGGTACATTTTTTGTTGACTCCAAGAAGGATAGTGGTCCTGGTGCAAAAGGTGATGCCTCTGCTAGTAAGTTGCCGTCACCAGTTGGTGACTCGGTATCYAGCTTAGGTTACCGCCCAGTTGACTCTACTAGTGGAAATCCAATCCGGGGAAATGAAGAGCATCAAACTATGGGGGGAAGTCATTACATGATTCAACAGCTTGGTTTGCACATGACGCCTCCCCGGTCAACAGACTGGGGAAGCCATCCGGAATCAAGAAATTCCGGCTATGAGATGGCAGGAAGAACAGGTCCGGGGGCCCACCAATCTCCAGAGAACGGGGGCTATGACCAGATCACTGATTGA 1152 0.5243 MEPNDNQLSSYFHQQQQQHHHQQQHHHQQHHQSAAAPSGVGAXTAVSPTNGLLGNTDGAHSHMLYPHTVPSAVSSQLVEPPAKRKRGRPRKYGTPEQALAAKKASTTSSSAAHSFSPTSSSSAAKKSLPHQPRALGGSSFPSSSSKKSHSFGLGNAGQGFTPHVIAVAAGEDVGQKIMLFMQQSKREMCILSASGSISNASLRQPATSGGNVTYEGRFDIISLTGSYVRNELGNRSGGLSVCLSNTXGQIIGGGVGGPLKAAGPVQVIVGTFFVDSKKDSGPGAKGDASASKLPSPVGDSVSSLGYRPVDSTSGNPIRGNEEHQTMGGSHYMIQQLGLHMTPPRSTDWGSHPESRNSGYEMAGRTGPGAHQSPENGGYDQITD* 384
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0158 383 MobiDBLite consensus disorder prediction 278 383 - -
Amo06g0158 383 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 375 - -
Amo06g0158 383 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 375 IPR039605 GO:0003680
Amo06g0158 383 MobiDBLite consensus disorder prediction 305 331 - -
Amo06g0158 383 Pfam Plants and Prokaryotes Conserved (PCC) domain 162 272 IPR005175 -
Amo06g0158 383 MobiDBLite consensus disorder prediction 1 18 - -
Amo06g0158 383 CDD DUF296 161 272 IPR005175 -
Amo06g0158 383 MobiDBLite consensus disorder prediction 100 127 - -
Amo06g0158 383 Gene3D - 162 283 - -
Amo06g0158 383 MobiDBLite consensus disorder prediction 1 154 - -
Amo06g0158 383 ProSiteProfiles PPC domain profile profile. 156 293 IPR005175 -
Amo06g0158 383 SUPERFAMILY AF0104/ALDC/Ptd012-like 158 273 - -
Amo06g0158 383 MobiDBLite consensus disorder prediction 136 154 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo06g0158 Amo-Chr6 2446904 2452197 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0158 57 380 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 49.713 3.15e-85 263