Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0155 ATGGCGAATCGATGGTGGACCGATCCGGTGGGTCTGACCGGAGTAGACAACTCCACCAACTCTCCCATCAAGAAACCCGATCTGGGTTTATCTGCTCCCATCAACAAGCACGAAGAACAAGATGACAACAACAGCGACGACTACCCCAAGGAAGGAGCAATCGAGCTCTCCGCCACGCGCCGCCCAAGGGGCCGTCCTCCTGGTTCCAAGAACAAGCCCAAGCCGCCGATATTCGTCACCAGAGACAGCCCTAACGCACTCAGAAGCCACGTCATGGAGGTTGCTAACGGTGCTGACATCACCGATAGCTTGGTTCAGTTCGCAAGGAAGCGACAGAGAGGGGTCTGCGTTCTCAGCGCCACCGGGACAGTCGCCAACGTCACTCTCCGGCAGCCAACTGCTCCCGGCGCCGTCATGGCACTCCATGGGCGATTTGAGATCATATCTTTAACAGGCTCGTTTCTTCCCGGGCCGTCGCCGGCGGGGTCGACGGGGCTGACCGTGTACCTGGCTGGAGGGCAGGGGCAGGTGGTGGGCGGCGGGGTGGTGGGGCCTCTTGTGGCGTCGGGATCAGTTATGATAATGGCGGCTACGTTTTCGAATGCAGTTTATGAGAGATTGCCAATTGAGCAGGATGAGGATCAACTTCAAGAAGTGCCTCCTGCTGCCAACGGCGGTGGGTCTCCACCGGTGTTAGGTGGTTCCGGCGGGGATGGTTATATGGTTGGGCAGCTCAGCCATGAAGGTTCTTGGGGTCATTCGAGACCACCACCACCCCCCTATTGA 786 0.5865 MANRWWTDPVGLTGVDNSTNSPIKKPDLGLSAPINKHEEQDDNNSDDYPKEGAIELSATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGADITDSLVQFARKRQRGVCVLSATGTVANVTLRQPTAPGAVMALHGRFEIISLTGSFLPGPSPAGSTGLTVYLAGGQGQVVGGGVVGPLVASGSVMIMAATFSNAVYERLPIEQDEDQLQEVPPAANGGGSPPVLGGSGGDGYMVGQLSHEGSWGHSRPPPPPY* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0155 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 8 240 - -
Amo06g0155 261 MobiDBLite consensus disorder prediction 1 84 - -
Amo06g0155 261 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 213 - -
Amo06g0155 261 ProSiteProfiles PPC domain profile profile. 84 222 IPR005175 -
Amo06g0155 261 Gene3D - 87 218 - -
Amo06g0155 261 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 201 IPR005175 -
Amo06g0155 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 240 IPR014476 GO:0003680
Amo06g0155 261 MobiDBLite consensus disorder prediction 218 261 - -
Amo06g0155 261 MobiDBLite consensus disorder prediction 31 58 - -
Amo06g0155 261 CDD DUF296 88 171 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0155 Amo-Chr6 2412763 2413950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0155 1 257 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 56.897 1.07e-87 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0155 - - aprc:113863548 330.102