Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0127 ATGACTTCACTATCATCGTCTCCCTCTTTAGTCTTTACAGTCCGAAGGCGCCAACCGGAGCTGGTGGCTCCAGCTACGCCCACTCCCCGCGAAGTTAAACTATTATCTGACATAGATGATCAAGAAGGGTTGCGTTTCCAAATTCCATTCTTTCATATTTATCAGCACAAGCCATCTATGGAAGGAAAAGACCCAGTTAGGGTTATAAGAGATGCACTCTCGAGAACACTTGTGTTTTACTACCCATTTGCCGGCAGGATCAGGGAAGGTCATGGCCGCAAGTTGATGGTGGATTGTACCGAGGAGGGTGTCTTGTTTATTGAGGCAGATGCTGACGTAACACTTGATCAACTTCGTGGCTCTCTTCATCCTCCATTCCCATGCTCCCAAGAACTCCTTTATAATGTTCCAGGCTCCGATGGAATTGTCAACTGCCCCCTTCTACTCATACAGGTGACACGCTTTAAGTGCGGCGGTTTTGTTTTTGCCATACGCGTGAATCACACGATGATGGATGCAACTGGTCTAGTACAATTTGTGAGTGCTTTAACTGAAATGGCTCAAGGTGCTCATCAACCTTCCATTCTGCCTGTATGGCAAAGGGAGCTCCTACTTGCAAGAGACCCACCACAAATCACATGCAACCATCGCGAATATGAGCAACTTCCAAATACCAAAGAAGGGACCATCATTTCTTATGAGAACAATATGGTTCAACGCTCCTTTTTCTTTGGACCAACTGAAATAGCTTCCCTTCGTCGTTTGGTTCCACGTCACCTTGGCCAATGCACTCGATTTGAGCTTATAACTGTATGCTTATGGCGTTGCCGTACAAAAGCATTGCAACTTGCGCCAGAAGATGATGTTCGCATGATGTGCATCGTGAATGCACGCGCTAGGTTTAACCCTACTATACCCCTTGGTTATTACGGAAACGCTTTTGTTTATCCGGCAGCAGTTTCTAGTGTAAGGAAGCTTTGTGAAAATCCCTTTTATTATGCCGTAGAGTTAATAAAGAAAGTAAAAACTGAGGTGACAGAAGAGTACGTGCATTCAGTGGCAGATCTAATGGTTACAAAAGGACGACCCTTATTTACAACCGTAGGATCTTTTATTGTGTCAAACTTGACACGTTTTGGGTTAAGAGAAGCAGATTTTGGATGGGGCAAAGCATTATATGCTGGTGTGTCTCAAGGTGGAGTTGGGCCGGCTTTTCATGGAGTAACCTTTTTTATGGATTATGAGAATGAAAAAGGAGAAGAAGGCGTATTATTTCCAATTTACTTGCCTTCCAAAGCTATGGAGAGATTTGAGAAAGAGTTAGGTGATTTGTTTGGTGGGGACCTTAAGAGTATCTTTAATATTTGA 1368 0.4386 MTSLSSSPSLVFTVRRRQPELVAPATPTPREVKLLSDIDDQEGLRFQIPFFHIYQHKPSMEGKDPVRVIRDALSRTLVFYYPFAGRIREGHGRKLMVDCTEEGVLFIEADADVTLDQLRGSLHPPFPCSQELLYNVPGSDGIVNCPLLLIQVTRFKCGGFVFAIRVNHTMMDATGLVQFVSALTEMAQGAHQPSILPVWQRELLLARDPPQITCNHREYEQLPNTKEGTIISYENNMVQRSFFFGPTEIASLRRLVPRHLGQCTRFELITVCLWRCRTKALQLAPEDDVRMMCIVNARARFNPTIPLGYYGNAFVYPAAVSSVRKLCENPFYYAVELIKKVKTEVTEEYVHSVADLMVTKGRPLFTTVGSFIVSNLTRFGLREADFGWGKALYAGVSQGGVGPAFHGVTFFMDYENEKGEEGVLFPIYLPSKAMERFEKELGDLFGGDLKSIFNI* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0127 455 PANTHER ALCOHOL ACYLTRANSFERASE 12 445 - -
Amo06g0127 455 Gene3D - 11 220 IPR023213 -
Amo06g0127 455 Pfam Transferase family 14 441 - -
Amo06g0127 455 Gene3D - 221 441 IPR023213 -
Amo06g0127 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0127 Amo-Chr6 2057391 2061865 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0127 14 441 Monolignol Biosynthesis Gene Families AT5G48930 28.700 1.57e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0127 K19861 - gmx:100787907 643.269