Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0107 ATGGCCTTCTCTGCAATTGCATCTTCATTCACACTGCTTCTTCTCATTCTCATATTACTATTCTTCTTCGTAAATTTACCATCTTCTCCTTCTCTCTTCTCCACCTCCACCGCCACCGTCACCACACGCAGGTCCCTTCTAACCACCACGTGTTCCGCTGACGAGGGATCCAATGGCGGGATCCTCAACTACCTCTACATCCACAACTGCATATTCCGCCGCAACGCCCTCCTCTCCATCCCCGCCCTCTCGATGCTCCTCCTCCTCCAATTCTACATCCTCATCAAGACCGCCCAGCACCACTTCTCCGTCGTCACCACCAAGCTTGCCTCTCACCTCAACCTCTCCCCCTCCATGGCCGCCGTCACCCTCCTAGCACTCGGCAACGGCTCTCCCGACGTCTTCTCCTCCCTCGCCGCCCTCCGCTCCGGCCAGTACCGCACCGGATTCGGCGCCATCCTCTCCGCCGGTACCTTCGTCTCCGCCCTCGTTGTCGGATTCGTCGCCATCTACGCTGCTCCGTTCTCCCTCGACCCCGCGCCCTTCGTCAGAGACGTGCTCTTCTACTTGACGGCAGCGATGTTCCTCTTCTACGTGTATCTTAGCGCCGAGATCTTCCTGTGGCAGGCGATTGGATTCGTAGGGTTTTATGCATTCTTCGTTGGTCTCGTGTTCTATATGGACTTGGGAGTAGTTGATGGCAGAGGCAAGAGTGGGAATTCTTCCACAGATCTTGAGGAGCAGAAGGAATTAGTTGCGGTGCACGTTGACTCCGACGCCAAGGTTTCGGGATCTATGAACGACGAGAAGCGCAGTTCTGGATTCCTGGGAGCTTATGGATTGATTTCTAAAGCATGGGAGATTCCTGTTGCCACTCTCTTAAAACTGTCGATCCCCGAGCCAGCGCCGTCGCAATGGAGCAGACTTTACTCGTCGGCCAACATCGCTCTTTGTCCGATATCCCTCTTATATGCCTGCAAATCATTTGTGCCATTTGATCATCCCATAGCTTTCCTCCTCCCCAACACTGACTTGCCCCTCTGGTCAGTGGTGCTCACCACAAGCTTCTGCCTTGCATGCCTTTATTTTGTAATGGAAAAAGAACCACCCAAAACCGAGCAAATACCTGTGGTTGTCATGGCGTTTGTTATGAGCGTGTTTTGGATATCTACCACAGCTGGAGAACTGGTGAACTGCCTTGAAACTCTAGGTCTAGTTCTCAAACTACCACCGGCAATCCTCGGTCTCACGGTGCTGGCATGGGGAAATTCAGTGGGGGATCTCGTCGCCGATGTTGCGGTAGCTAAAGCCGGTCATCCGGCTATGGCAATGGCTGGATGCTTTGCTGGACCAATGTTTAACATGCTTGTAGGTCTTGGAACAGCTCTGGTGATTCAGACGGCAAATATTCACCCTAAAGCCTATGTGCTTAATTTCCACGTAGGTATCGTGATTGCATTTGTGTTCCTGCTTTTAAGCCTTATGGGGTCTCTCTTAGTGATCACTTGGTGCAGATTCCGAGTGCCTAGGTTTTGGGGGTTTTGTCTCGTCGGCCTCTATGTTGTTTTTGTAGCAGTGAGTATGATGGTGGCCATGTTTTCAGGGTGA 1608 0.5236 MAFSAIASSFTLLLLILILLFFFVNLPSSPSLFSTSTATVTTRRSLLTTTCSADEGSNGGILNYLYIHNCIFRRNALLSIPALSMLLLLQFYILIKTAQHHFSVVTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRSGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFSLDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAIGFVGFYAFFVGLVFYMDLGVVDGRGKSGNSSTDLEEQKELVAVHVDSDAKVSGSMNDEKRSSGFLGAYGLISKAWEIPVATLLKLSIPEPAPSQWSRLYSSANIALCPISLLYACKSFVPFDHPIAFLLPNTDLPLWSVVLTTSFCLACLYFVMEKEPPKTEQIPVVVMAFVMSVFWISTTAGELVNCLETLGLVLKLPPAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTANIHPKAYVLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGLYVVFVAVSMMVAMFSG* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0107 535 Gene3D - 309 531 IPR044880 -
Amo06g0107 535 Gene3D - 115 244 IPR044880 -
Amo06g0107 535 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 279 534 - -
Amo06g0107 535 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 48 244 - -
Amo06g0107 535 Pfam Sodium/calcium exchanger protein 379 528 IPR004837 GO:0016021|GO:0055085
Amo06g0107 535 Pfam Sodium/calcium exchanger protein 84 224 IPR004837 GO:0016021|GO:0055085
Amo06g0107 535 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 48 244 - -
Amo06g0107 535 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 279 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0107 Amo-Chr6 1099304 1102134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0107 4 534 Antiporters AT1G08960 65.996 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0107 K13754 - gmx:100775437 737.258