Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0103 ATGGAAGTAATTAACAGCAACACAACCGCTGTGCCTGCAACCAACCAAACTTACAAACACTCACATTCACATTCACATTCCAATAATGATTTCCCCTCCAAAACCATTCTCATTACCATCACTCTCCTCACCTCTCTTACCCTCTTCTTTGCCATTTTTCTTGTTGCATTCATGCTCCGTCGTCTCAAATCCAAACACTTCGCTTCAAGTAGTCCAGAAGTGAAAGGAGGATGTGTTGATCATCAACATCCAACACCAACAACACCAAATAAATTTCGAGGTGTTCAAGTGTTGACATACAGAGAGATAGAAGTGGCGACAGGTGGAATGAGTGAAGGAAATGTAATTGGGAATGGAGATTCTGGTTTGGTGTACAAAGGAATCCTAAGTGATGGAACTTTGGCAGCAATTAAACTCATGCGAAGGGAAGGGAAGCAAGAAGAGCGTGCCTTCAGAATTGAGCCGTTTGCACTGTCCTTATTTGGTGGATTGCTAGGCTATTGTGCGGACCATCACCACAGGGTGTTGGTGTTTGAATACATGCCTAATGGAACACTCTATCACCATCTCCACTCTCTTAATTACAATAATCAATCTCAGCCGTTGGATTGGTGGACCAGGATGAGAATAGCCCTTGATTGTGCCATGGCTTTGGAGTTCTTGCATGAACATGCTCTCTCCCCTGTCATACACCGTCTCCATTTTGGATTGGCCAAGACTGGCTCTGACAAGATCAACGGTCAGATTTCCACCCGCGTGTTAGGGACCACCGGATATCTCGCACCCGAGTATGCATCAACAGGAAAGCTTACTACAAAATCTGATGTATATAGCTATGGTGTGGTTCTTCTGGAAGTGCTAACCGGTCGCGTACCGGTTGATATTGAGCGACCTCCGGGAGAACATGTACTTGTCTCTTGGGCTCTTCCAAGGTTAACAAACAGAGAAAAGGTGGTGGAAATGGTTGACCCTGCTCTTCGAGGACAGTACTCAAAGAAGGATCTAATTCAGGTAGCAGCAATAGCAGCAATGTGCATACAAACAGAAGCAGATTACAGGCCACTAATGACGGATATTGTTCAATCACTGATACCACTTGTTAGGAATCCCTCCTCATCATCTAGTTCCTTAAGATTTCTTAAAAGTCCAACCTATTAA 1158 0.443 MEVINSNTTAVPATNQTYKHSHSHSHSNNDFPSKTILITITLLTSLTLFFAIFLVAFMLRRLKSKHFASSSPEVKGGCVDHQHPTPTTPNKFRGVQVLTYREIEVATGGMSEGNVIGNGDSGLVYKGILSDGTLAAIKLMRREGKQEERAFRIEPFALSLFGGLLGYCADHHHRVLVFEYMPNGTLYHHLHSLNYNNQSQPLDWWTRMRIALDCAMALEFLHEHALSPVIHRLHFGLAKTGSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEVLTGRVPVDIERPPGEHVLVSWALPRLTNREKVVEMVDPALRGQYSKKDLIQVAAIAAMCIQTEADYRPLMTDIVQSLIPLVRNPSSSSSSLRFLKSPTY* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0103 385 ProSiteProfiles Protein kinase domain profile. 110 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g0103 385 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 67 379 - -
Amo06g0103 385 Gene3D Phosphorylase Kinase; domain 1 82 180 - -
Amo06g0103 385 MobiDBLite consensus disorder prediction 1 28 - -
Amo06g0103 385 PANTHER OS01G0750732 PROTEIN 67 379 - -
Amo06g0103 385 Pfam Protein tyrosine and serine/threonine kinase 113 363 IPR001245 GO:0004672|GO:0006468
Amo06g0103 385 Gene3D Transferase(Phosphotransferase) domain 1 181 377 - -
Amo06g0103 385 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Amo06g0103 385 SUPERFAMILY Protein kinase-like (PK-like) 85 363 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0103 Amo-Chr6 1071968 1075527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0103 34 384 Receptor kinase-like Gene Family AT3G58690 50.909 2.45e-124 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Amo06g0103 PK_Tyr_Ser-Thr 3.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0103 - - mtr:MTR_1g082580 476.863