Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0098 ATGTTGGGAATGAATAATCGTGTTGATTTGGTGGAGAAAATCACTCCTTGGAGGGAATCATGGAAAGTGCATGTTAAAGTTGTGAAGTTGTGGTACCACAAGAATCCTGCTTTGGATCCTTCTCAAAATCTGTTGCATATGGTCTTAATGGATGAGAAGTTACACAAGATCCAAGCTACCATTAGAGATGAGCTTATATCAAAGTTTGCTGTGTCTCTAAAMGAAGGMGATCTGTATTTGATMACCCATTTTACAGTTMTYCCAAACACTGGTTTYAACAGAGTGARCAAACATCGGTTCAGACTTTTGTTCCAATACAAGACCTCTGTTGTTTCTGTGGTCTCTCCAAGGATACCTCATTCCGGGTTGTGTTTTACATCAATAGATGAAATTGATCAAATGACAAAGGACCACAATTTCCTTATTGACTTTGTTGGGATCATTACTGGTGTTCGAAAAGAAAGAGATGTAGCATCATATGGGAAGCTCATCAAAGCAGTTGTGCTAGAAGTTTTTACTCATGGGAAAAAGGTCCAATGCAATGTGTTTGGAAATGCTTGTGATCTCTTGGAATATGAAAACTTACAAAAATATCCAAGATCTCCGATGATTGTCCTTGAGTCTTTTAAAATCAAACCAATTGAAGGTGGAGTAATTCTACAGAATGTGATCAATGTCTCTAGATTATTCATTAATCCAGACATTCCTGAGTCTGTTGAGTTCCTAAGCAGTAATATTCAAGATCTTGATGTAGATAACGGGGATGCTCATTACTTTGTAATMGGGACAATTAAGGAAGTTATGGATGAACCAGATTGGTGGTACTACTCATGTGTATGTGGTCATWCTGTTGTTGACCATGAGGATCTCTACCTTTGTGATGCTTGTMGTTCATGTGTTGAACATGTTATGCTCAAGTATAGGATTCGGGTAAAGATTCACCATGCTGGGTGTGATGTTTTGTTTGTTCTGCTTGATAATGCGGCAACAAAACTATTTGGAAAAACCTGTTCTGAAGCATTTCTCAGGATAGACGAAGAATTCCCTWTTGATCCTAGTGTGCTTGCAGTACGAATTCTTTCATATTGA 1089 0.3756 MLGMNNRVDLVEKITPWRESWKVHVKVVKLWYHKNPALDPSQNLLHMVLMDEKLHKIQATIRDELISKFAVSLXEGDLYLITHFTVXPNTGFNRVXKHRFRLLFQYKTSVVSVVSPRIPHSGLCFTSIDEIDQMTKDHNFLIDFVGIITGVRKERDVASYGKLIKAVVLEVFTHGKKVQCNVFGNACDLLEYENLQKYPRSPMIVLESFKIKPIEGGVILQNVINVSRLFINPDIPESVEFLSSNIQDLDVDNGDAHYFVIGTIKEVMDEPDWWYYSCVCGHXVVDHEDLYLCDACXSCVEHVMLKYRIRVKIHHAGCDVLFVLLDNAATKLFGKTCSEAFLRIDEEFPXDPSVLAVRILSY* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0098 362 Pfam Domain of unknown function DUF223 47 139 IPR003871 -
Amo06g0098 362 Gene3D - 237 356 IPR012340 -
Amo06g0098 362 SUPERFAMILY Nucleic acid-binding proteins 249 346 IPR012340 -
Amo06g0098 362 SUPERFAMILY Nucleic acid-binding proteins 10 113 IPR012340 -
Amo06g0098 362 SUPERFAMILY Nucleic acid-binding proteins 125 244 IPR012340 -
Amo06g0098 362 Gene3D - 10 114 IPR012340 -
Amo06g0098 362 CDD RPA1_DBD_A_like 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0098 Amo-Chr6 1019669 1021767 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0098 2 337 Core DNA Replication Machinery Family AT5G08020 20.823 9.30e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0098 - - adu:110276056 669.077