Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0076 ATGGGCACCATGTGTGTGATAAGAACAAAACGTAGTGTCGTTAAGCCAGCTGAAGAGACACCATTGATCACACTAGACCTATCATTGATCGATAAGATACCTGTTCTAAGGTGCGATGCCAGAACGTTGCATGTGTTCAGGCATGGCCCTGAAGCTGCAAGTGTCATAAGAGAAGCCTTGTCTAGAGCATTGGTTCCTTACTACCCTCTTGCTGGGCGCCTCATTCACAAATCGGAACAAAATGATGAAGCAGGGTGCCTCCAAGTTCAATGCTCCGGGGACGGTGCCTGGTTTGTTGAGGCTTCTACTGATTGCACTCTTCAATCTCTTCATTTCTTTGATGACATTCAGTCTATTCCATATGATCTTCTTCTTCCTGATGATGTTCCTCAAACCGAAGGCATTGACCCCCTTGTCAAAATGCAGGTGACACAATTTGGATGTGGAGGATTTGTGATAGGCCTCGTATTCTGCCACACCATATGCGATGGCCTTGGTGCTGCCCAATTTCTCAACGCCCTAGAACACGCTACCGTAGACATCCCCATGCATCGAATCAACAACCTCAAGCAAGAATTTCAGCGGCTCACCGGACTCGCTTGCTCTTCCTTCGAAATCGTAGCCGCGGGATTATGGACAAGCAGAGCAAGAGCCATTGATTTCGAATCCAACGCCGAGCTGAAGCTTGTGTTCTTCGCTAACTGCCGTCAAATCTTGGACCCTCCTCTCCCCGCTGGCTTCTACGGCAACTGTTTCTTCCCAGTGACGATCACCGCTTCCTACGAGTCGCTCAGAGACGCATCGCTCTTCGATGTGGTGAAAATGATACAAGATGCAAAGACCAAATTACCCTCCGAGTTTGGCAAGTATTTGAAGGTTGACTACGGGTGGGGTCCACCGGTACACGTGGTGCCCATACAAGGGTCAAGCATAATCCCCGTAGGAATTGTGGGGTACATGCCTCTCACCCTCCTCCCAAACAAAGGAATTCGTTTGATGACGTGGTGCGTTGAACAAGATCATCGCCATCCCTTCCTCCATCAAATGCATGCTCTCATGGATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATTATTATTATTATTTTTACTATTATTATTATAAGCTCTTTTTTAATATCTCTCAATCAATAA 1167 0.4533 MGTMCVIRTKRSVVKPAEETPLITLDLSLIDKIPVLRCDARTLHVFRHGPEAASVIREALSRALVPYYPLAGRLIHKSEQNDEAGCLQVQCSGDGAWFVEASTDCTLQSLHFFDDIQSIPYDLLLPDDVPQTEGIDPLVKMQVTQFGCGGFVIGLVFCHTICDGLGAAQFLNALEHATVDIPMHRINNLKQEFQRLTGLACSSFEIVAAGLWTSRARAIDFESNAELKLVFFANCRQILDPPLPAGFYGNCFFPVTITASYESLRDASLFDVVKMIQDAKTKLPSEFGKYLKVDYGWGPPVHVVPIQGSSIIPVGIVGYMPLTLLPNKGIRLMTWCVEQDHRHPFLHQMHALMDYYYYYYYYYYYYYYIIIIIFTIIIISSFLISLNQ* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0076 388 Gene3D - 2 195 IPR023213 -
Amo06g0076 388 Pfam Transferase family 8 174 - -
Amo06g0076 388 Pfam Transferase family 187 282 - -
Amo06g0076 388 PANTHER ACYL TRANSFERASE 4 291 351 - -
Amo06g0076 388 PANTHER ACYL TRANSFERASE 4 3 175 - -
Amo06g0076 388 PANTHER ACYL TRANSFERASE 4 291 351 - -
Amo06g0076 388 PANTHER ACYL TRANSFERASE 4 3 175 - -
Amo06g0076 388 PANTHER ACYL TRANSFERASE 4 174 292 - -
Amo06g0076 388 PANTHER ACYL TRANSFERASE 4 174 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0076 Amo-Chr6 797567 800186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0076 12 278 Monolignol Biosynthesis Gene Families AT5G48930 27.190 1.89e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0076 - - aip:107646575 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0963 16 15499568 15500902 Amo06g0076 06 797567 800186 hybridization