Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0048 ATGGGTAATGGAACTTCTCGCGTTTTTAGCTGTTTGGTGCCATATAACGGCAAGAATGGGGTTGATTTGGAGTTTTTGGAGCCATTAGATGAAGGTTTAGGCCACTCYTTTTGTTATGTKAGGCCATCCATTTTTGAATCTCCTGCTATTACCCCATCAAATTCTGAGAGGTTTACACTAGATTCTAGCACCCTTGATTCGGAGACATTGAGTGGGTCATTTAGGAATGATGGCATTGAAGATTCTTCTGCCACACACAAGCCAGGGAAGAACTTACCTGARACCACATTCAAAACAATCTCAGGGGCTTCGGTCAGTGCCAATGTTTCAACTGCCAGGACCGGTAACCAGAATGCACTACTTGCTAGTAATTTYCTAGAACCTGCTGCRTCGTTTGAGGGAACTGCCTCATTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGTGGCTCTGGACCTTTGAATGGCTTCATGTCTGGACCTTTGGAGAGGGGTTTTGCCTCTGGTCCTTTGGATAAGGGTGGTGGYTTCATGTCTGGGCCMATGGAGAAGGGGGTTATGTCTGGTCCTCTTGATGCCACTGACAAATCCAACTTCTCCGCACCACTTGCTCGTGGTCGCCGAAGGCCGCACCTCCACCGCCTGATGAGAAGTGTAAGTGGACCTATGAGAAACTCTCTTTCTCGGACTTTCTCTAAGCATTCGATGGGTGGTAGTTGGATGCAACGGTTATTCCTTCACCCYGTGACTCAACTAGCTTGGAATTCCAAAGAGGCAAAGTTTCGGCCTGAAGTCTCAAGAGATTGTGTTGAATTTGAGTATAAACAAACCCACAATTTGCAGTGGGCTCATGGCAAGGCTGGTGAAGATAGGGTGCATGTTGTACTTTCTGAAGAACAAGGGTGGCTGTTTATTGGGATATATGACGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGCAATCTTTATAGATTTATAGACAAGGAATTAGAGGGATTGCTCTGGCATTATGAATATAATACYGTCAATCCACTTGAACCCGAAGTCCATAAAAGAGTGAATGCAATGGTTCCTCCAGAATGCAAARGAGAGGAAATGTCRGAAAGTTCTTGCTGTTTGGAAGATTCTTGTCCAGCTAAGGTCAAGGATCAATCATCTARCAGYGAGATAGTGGAGGAAAACACTGACGTTAAGGTGAAGGTGGAACAACTTAATTGTGGAAGTCCTAGTATCTCCCGATTGGATGGTCAAGGTAGAAAAAGCATGAAACTTTATGAGTTACTTCAGATGGAATCTTGGGACGAACAGGGTTTTCTGTCAGTCTCAGAGCAAGGTAAGGATTCTTCCATTGCTAGGGAAATAAWACAAGAAGATAGACCTAGACATCAGGATGAAGGCCCTACTACATCRGGAGAAAATGGAGGCACTGGRTTTAGTTCAAACAACCAAGTTCCTGTTGCTSCTTTTTCTGTTAAAGGACAAAGGCAGGATCCGAGAAAATCGTATATCAGTATGAAAATCAGAAAYATGTACAGGAAGCAGAAGTCCTTGCGCAAAAACCTYTTTCCSTGGAATTATGATTGGCATAGGGAAGAAGCCTGTGTTGACAAGAAAATAGTAGAAACCTTGGGGCCTATTAGAAAATGCAAGTCTGGMGTAGATCATAGTGCAGTTTTAAGAGCAATGGCACAAGCTCTTGAAAGAACAGAAGAAGCATACATGGACATGGTTGAGAATAATCTAGATAAAAATCCAGAGCTTGCCTTAATGGGATCTTGTGTTTTAGTGATGTTAATGAAGGATCAGGATGTTTATGTAATGAATGTTGGAGACAGCCGTGTAATTTTGGCGCAAGAAAGACCAAATGATCGTCATCCCAATCCAAGCTTCATCAAGGATGACGTGAGGCATAGAAATCGATCTAGAGARTCATTAGTTGGCATGGAGCTGGATAGAATTTCAGAGGAGTCTCCAATGCACAACATAAACAGTCGTCTTAACATGATGAACAAAAAYAGAGAGATSTCCCTTTGTGGACTGAAAATGAGGGCTGTTCAGCTTTCAACAGATCACAGCACAAGTATTGAAGAGGAAGTGTTTAGAATAAGAGCAGAACACCCAGATGATAATCAAGCCATATTCAATGATAGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGGTCACCACTTTCAATGAACCTCTACTGGAGATGTTTCGAGTTGATTATGTGGGCAATGCTCCTTACCTAAGTTGCACATCTTCCGTTGTTCATCATCGGCTTTGCTCAAGTGATCGGTTCTTGGTACTATCCTCCGATGGGCTTTACCAATATTTCAGCAATGAAGAGGTAGTTGCCCATGTTACGTGGTTCATGGAAAATGTCCCCGGTGGCGATCCTGCTCAATATCTTATTGCTGAGCTTCTTCTCCGTGCTGCCAAGAAGAATGGAATGGATTTTCATGAATTGCTTGATATTCCTCATGGAGATAGGCGTAAATATCATGATGATGTATCTGTTATGGTGGTTTCTTTGGAGGGAAGGATATGGAGATCATCGGGATAA 2592 0.4282 MGNGTSRVFSCLVPYNGKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTLDSSTLDSETLSGSFRNDGIEDSSATHKPGKNLPETTFKTISGASVSANVSTARTGNQNALLASNFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDKGGGFMSGPMEKGVMSGPLDATDKSNFSAPLARGRRRPHLHRLMRSVSGPMRNSLSRTFSKHSMGGSWMQRLFLHPVTQLAWNSKEAKFRPEVSRDCVEFEYKQTHNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSNLYRFIDKELEGLLWHYEYNTVNPLEPEVHKRVNAMVPPECKXEEMSESSCCLEDSCPAKVKDQSSXSEIVEENTDVKVKVEQLNCGSPSISRLDGQGRKSMKLYELLQMESWDEQGFLSVSEQGKDSSIAREIXQEDRPRHQDEGPTTSGENGGTGFSSNNQVPVAXFSVKGQRQDPRKSYISMKIRNMYRKQKSLRKNLFPWNYDWHREEACVDKKIVETLGPIRKCKSGVDHSAVLRAMAQALERTEEAYMDMVENNLDKNPELALMGSCVLVMLMKDQDVYVMNVGDSRVILAQERPNDRHPNPSFIKDDVRHRNRSRESLVGMELDRISEESPMHNINSRLNMMNKNREXSLCGLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRVTTFNEPLLEMFRVDYVGNAPYLSCTSSVVHHRLCSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPGGDPAQYLIAELLLRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0048 863 MobiDBLite consensus disorder prediction 69 93 - -
Amo06g0048 863 Coils Coil 560 580 - -
Amo06g0048 863 MobiDBLite consensus disorder prediction 468 485 - -
Amo06g0048 863 MobiDBLite consensus disorder prediction 439 485 - -
Amo06g0048 863 CDD PP2Cc 555 854 IPR001932 -
Amo06g0048 863 ProSiteProfiles PPM-type phosphatase domain profile. 272 854 IPR001932 -
Amo06g0048 863 MobiDBLite consensus disorder prediction 167 200 - -
Amo06g0048 863 Pfam Protein phosphatase 2C 565 622 IPR001932 -
Amo06g0048 863 Pfam Protein phosphatase 2C 678 826 IPR001932 -
Amo06g0048 863 SMART PP2C_4 272 852 IPR001932 -
Amo06g0048 863 MobiDBLite consensus disorder prediction 451 467 - -
Amo06g0048 863 PANTHER PROTEIN PHOSPHATASE 2C 11 356 IPR015655 GO:0004722|GO:0006470
Amo06g0048 863 PANTHER PROTEIN PHOSPHATASE 2C 499 863 IPR015655 GO:0004722|GO:0006470
Amo06g0048 863 PANTHER PROTEIN PHOSPHATASE 2C 32 11 356 - -
Amo06g0048 863 PANTHER PROTEIN PHOSPHATASE 2C 32 499 863 - -
Amo06g0048 863 Gene3D - 500 860 IPR036457 -
Amo06g0048 863 Gene3D - 250 410 IPR036457 -
Amo06g0048 863 SUPERFAMILY PP2C-like 284 855 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0048 Amo-Chr6 500640 504803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0048 1 863 PP2C-type Phosphatase Gene Family AT2G46920 66.131 0.0 1106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0048 - - gmx:100786856 1421.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0985 16 15946914 15952007 Amo06g0048 06 500640 504803 hybridization