Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0043 ATGGCACAGCGGATGCAGCAAAGAGGGGATATTCGTGCGGCGCAGATGATGAGGATGAAGGATCTTTGGCTGAATCGCGATAAGCGAATCGTCGGAGCGATTCCCGGTGTGTATGTTGGCGACGTGTTCCTCTTTCGGATGGAATTGTGTTTTCTTGGATTGCACGCTTCCATGAGCGTCAACAATGAGCCAATTGCAACGAGTGTTATTGTCTCCGGTAGCTACGAGAATGATATGGATGAAAGAGATGTCATAATCTACACTGGACAAGGCGGACAGGCCATGAATTATAAAAAAAACATTCATTTAATAGAAAAAAATATCCTAATACTTAACAAAAGAAATATCTAG 351 0.4302 MAQRMQQRGDIRAAQMMRMKDLWLNRDKRIVGAIPGVYVGDVFLFRMELCFLGLHASMSVNNEPIATSVIVSGSYENDMDERDVIIYTGQGGQAMNYKKNIHLIEKNILILNKRNI* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0043 116 SMART G9a_1 27 107 IPR003105 -
Amo06g0043 116 Pfam SAD/SRA domain 31 98 IPR003105 -
Amo06g0043 116 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 5 102 - -
Amo06g0043 116 ProSiteProfiles YDG domain profile. 32 116 IPR003105 -
Amo06g0043 116 SUPERFAMILY PUA domain-like 14 101 IPR015947 -
Amo06g0043 116 Gene3D - 12 110 IPR036987 -
Amo06g0043 116 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 5 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0043 Amo-Chr6 454767 455150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0043 7 113 Su(var)3-9 homologs AT5G04940 40.336 4.87e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0043 K11420 - aip:107626851 166.392