Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0011 ATGGGAGTTTTCACTTTCGTGCTGCACAAGTCCGGCGGAGAATGGATGGCGAAGCAGCATAACGGTGACATCGAGGAGTCGTCTTCCGACACCTTTGAAATCCAACGGAAGCTTGTTAAGGCCGTCTGCACGGTCGAATCATCCAGCGCCATTCAATCCTCTTTCTCCATAGTTACCCCTTCCTCTGCTAAAATGGAGAGAAAAGATGATTTTCATCGAGTAATACACAGTGAGGTATATATATATATATAA 252 0.4524 MGVFTFVLHKSGGEWMAKQHNGDIEESSSDTFEIQRKLVKAVCTVESSSAIQSSFSIVTPSSAKMERKDDFHRVIHSEVYIYI* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0011 83 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 63 IPR044252 GO:0003735|GO:0005840
Amo06g0011 83 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0011 Amo-Chr6 171518 172535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0011 1 63 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 57.143 5.87e-23 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0011 K02942 - gmx:100804776 84.3445