Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0003 ATGGATTCAACGAGGGAATATGAAAGTGCTGCTGCTCATCAACATTCCAAACGGAGACGTGAAGAAGATACTCATCAACAGCCAGACAAATTTATCATTGTTGGCGGAAAATATTTGAGGTTCGCACTGGACATAGAGAAAGAGATTGTGCCCTGTGTGGCTAAATTTGTCCAAAAATTGGTGCGCGAGGAGATGGAACGTTTTCTAAGATTAAGACAAACTATGAATGAGACTGGCGCACATGTGGTCAAATCGTTTGAGCTGGTTTTCAAGAATGATTTACCTGCCACAGTGTTCACACACTCCAACATCAAAGCTAAAGATGGAAGCCCTATTCAGATTGCTTTATACGATGCTAGGTCTCAGCTAATAGTCACTGATGATCCGCTACTATCTTCCATTAAGGTCAAGATTTATGTCCTTAAGGGTGAGTTTGGTGGTGATGAGAATGAGAATTGGAGCACAAAGGAATTCAAGGCTAATATCTCCCGAGAAAGAGAGAATAGAGGCGAGTTACTGAAAGGAGATACGGTTATTACACTGAAGAATGGAGTTGGTTATATCGGTAAAATTATGTTTACTGATAACTCCAAGTGTACATGGAGCCGCCATTTCAGGTTAGGAGCCATTGTGTCTTCAACTTCCCATCAAGCTACCATCAAAGAAGCCATAAGTAATCCTTTTATCGTCAAGGATAGTAGAGGAGACTTGAATCAGAAACAGTACCCTCCATCCCTAAATGATGAAGTATATCGTTTGGAAAATATATCAAAAGGTGGGAAAATCCACGAGCGGCTGCTTGAGATTGGAATAAAAACGGTTAAGGATCTGCTGCAGCTATACGAAACCAATCCAACTTTATTGCAAGAGGTATATTTCCTAATCAAGGAGAGTAACAAAGATCAGAATTTTTTTTGTACTACTTGGTAA 930 0.4011 MDSTREYESAAAHQHSKRRREEDTHQQPDKFIIVGGKYLRFALDIEKEIVPCVAKFVQKLVREEMERFLRLRQTMNETGAHVVKSFELVFKNDLPATVFTHSNIKAKDGSPIQIALYDARSQLIVTDDPLLSSIKVKIYVLKGEFGGDENENWSTKEFKANISRERENRGELLKGDTVITLKNGVGYIGKIMFTDNSKCTWSRHFRLGAIVSSTSHQATIKEAISNPFIVKDSRGDLNQKQYPPSLNDEVYRLENISKGGKIHERLLEIGIKTVKDLLQLYETNPTLLQEVYFLIKESNKDQNFFCTTW* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0003 309 Pfam Calmodulin binding protein-like N-terminal domain 87 232 IPR046831 -
Amo06g0003 309 PANTHER CALMODULIN-BINDING PROTEIN 46 296 - -
Amo06g0003 309 Pfam Calmodulin binding protein central domain 245 291 IPR046830 -
Amo06g0003 309 PANTHER OS02G0177800 PROTEIN 46 296 IPR012416 GO:0005516
Amo06g0003 309 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0003 Amo-Chr6 86677 91415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0003 51 291 Calmodulin-binding Proteins AT5G62570 37.247 2.86e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0003 - - aip:107646520 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0432 16 6918174 6921522 Amo06g0003 06 86677 91415 hybridization