Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0001 AATGATGACAGAGACCTTCAAGTCTCTCTTTGTAAACGAAAAGCACTGCCACACACCCGCACTGCTTTCGGTATTACTTCCACCAATGACATGGCGTTACTCCGGGAATCTAAATTTAAGAGAGTGGTGAGTAATTCCACCAATGCTAGAACAGGAAATTCCACCTATGTTAAAAAAGGTGATTCCGCCTATGCTAGAACAGATGATTCCACCTATGCTGCACCGTTCGCTATCTTCCCCATGCGGAAGACTAGTCCAGCAGCAGGTGGAGGCAGATCATTGCAGTTATGTCTGATGAAAGGGTTGCCTTCAACCATTTTCACACACATCAACATCAGAGCGGAGGACAGTTCCACGCTCCAAGTTGCATTGTGCGATGCCACAGTTCTGCACTCCAAGGTCCAGCTATGTGTCCTGAGGGGTGACTTTGAAAAAGGAAGAAGTGAGCCTATAAGGGTGAAGGATAAGCGAGGAGTCGCAAATCAGAAACCGGATCGTCCTTCATTGGATGACAAGGTGAGTTGTCTGCATAAGATCTCCAAATATGGTCGGATCTGCAGGCAGTTGTCAGACGACGGAATTAAAACTGTCAAGGATCTGTTGCGTCGCCACACAACTGACCAAGCTTCACTAAGACAGAAAAATTGCAACATTTGGGGGAGGTGTTGGGAGAAGATTATTGAGCATGCTAAGTCTTGTGAGATAGATAATAATGAGCGCTACATCTACCAGTATTTCAAAAGAACAGCAGAGCAACCAATACCAATATCCCTGCTCTTAAATTGCATCTATGAGCCTGTGGCTATTTCATATGATGGCCAAAATTTTTGCAGTCTAGAGTCTTTGGATGTGGATGGCAAGGGTTGCGTGGAAACAATAAAGCAGGATGCATACAAGAACCTGAATGATTTGAAACCATTTGAAGCAAGTTCAGAATGTGGTGTTGTAGGGGAAGGGCAAGGACATATGGTTCAACCGTGGGCAATCGGTAGAGGCGAGCAAGTAGGGTGTTCCAGTCAACAACTGCTATATGAGGCCAAATGGGAAGGGTACATGAGTCCATTACAGCTTGATCAGTTACTAAATAACCCGTTGAACTCTGCTGGAGGTAATTATGGGGCAAAATCATTCGACTATTCATTCCCTAGCAGCTTTGATATGTATTTGTCTAACAAAAGTGACTCCGAAATGCTCTTAAATGGACCATACTCTATGCCGCTAATAGGAAGGCCAACCTTCTTTCCTACTATCACTTTTAATTTGCTTCATTACTTTAAGGGTGTGCGTGGTTGGAAGAATTATAAAATAATTTTTAGGAATTTTAAGATAGAAATATCATATTTTCATGTTTGGTTCAAAGTTTGA 1365 0.43 NDDRDLQVSLCKRKALPHTRTAFGITSTNDMALLRESKFKRVVSNSTNARTGNSTYVKKGDSAYARTDDSTYAAPFAIFPMRKTSPAAGGGRSLQLCLMKGLPSTIFTHINIRAEDSSTLQVALCDATVLHSKVQLCVLRGDFEKGRSEPIRVKDKRGVANQKPDRPSLDDKVSCLHKISKYGRICRQLSDDGIKTVKDLLRRHTTDQASLRQKNCNIWGRCWEKIIEHAKSCEIDNNERYIYQYFKRTAEQPIPISLLLNCIYEPVAISYDGQNFCSLESLDVDGKGCVETIKQDAYKNLNDLKPFEASSECGVVGEGQGHMVQPWAIGRGEQVGCSSQQLLYEAKWEGYMSPLQLDQLLNNPLNSAGGNYGAKSFDYSFPSSFDMYLSNKSDSEMLLNGPYSMPLIGRPTFFPTITFNLLHYFKGVRGWKNYKIIFRNFKIEISYFHVWFKV* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0001 454 Pfam Calmodulin binding protein central domain 168 233 IPR046830 -
Amo06g0001 454 Pfam Calmodulin binding protein C-terminal domain 256 306 IPR046829 -
Amo06g0001 454 PANTHER OS02G0177800 PROTEIN 18 145 IPR012416 GO:0005516
Amo06g0001 454 PANTHER CALMODULIN-BINDING PROTEIN 60 G 146 322 - -
Amo06g0001 454 PANTHER CALMODULIN-BINDING PROTEIN 60 G 18 145 - -
Amo06g0001 454 PANTHER OS02G0177800 PROTEIN 146 322 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0001 Amo-Chr6 40055 50155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0001 145 341 Calmodulin-binding Proteins AT5G26920 31.188 3.38e-16 78.6