Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4841 ATGACACTGTATGAGAAAAACAATGAACAACAACAACAACAACAACACACCACTATCCTAGTGAACAACGAACAAACTCCTCTTCTACTACCAAACAAGATATCAAAGACAAAGACCGGCGGCCCCTATAATGAGCCGCCGGCCGCATCATTTACAGGGGCCGTGTTCAATTTGTCGACCACCATCATTGGCGCCGGGATCATGGCCTTACCAGCAACCATGAAGGTTCTAGGCCTTGCCTTGGGGGTTGGTGCCATTGCGATTCTTGCTGTTCTTGCTGAGTACTCTTTGGATGTTCTGATGAGGTTCAGCAAAGTGGGGAATGCCGTAACSTATTCTCAAGTCATGGAATCTGCATTTGGACGTGTTGGAAGAAGGTTGTTCCAGATATGTATCTTTGTCAACAATTTTGGGATACTTGTTGTCTACATGATTATAATTGGCGATGTGCTATCCGGAACTTCGACAACTGGAATTCATCATTTTGGTGTATTAGACGGATGGTTTGGTGAACATTGGTGGACTATGCGAACTTTTGTTCTTCTTATGACAACGCTTTTTGTTCTTGCACCACTGGCATTCTTTAAGCAAATAGATTCACTGCGATATACTTCTGCTATTGCAGTAGCTTTGGCACTTGTTTTTCTAGTCATAKTTGTGGGAATCACATTCKTYAAATTATTTAATGGCGGCATAACTACTCCGAGYTTGCTTCCAAKTATTACAGACATGAATTCTATATGGAATCTCTTTACAGCCGTTCCAATTCTTGTGAATGCATTTGTTTGCCATTCCAATGTGCATACAATAAACATGGAGCTACAAGATTCTTCCCGAATCCAGCCAGTTGTGCGTGCATCATTGACTTTGAGTTCAGTTATCTATATTCTTACCGCCATATTTGGATTCCTTTTATTTGGCGAGTCAACGCTTGACGACGTTCTCGCCAACTTCGACGTTGACCTGGGAATCCCATACAGCAGTCTACTGAACGACATTGTTCGCATTAGTTATGCCTTCCACCTTATGCTTGTCTTCCCTGTTATCTTCTTTTCGCTACGGTTTAACTTTGATGAATTTATCTTTGCTTCATCTAAGTCTTTGAATGCAACTAAGTATAAGTTTGTTTCTACCACCGTTGTACTCGTTGCTTTAGTGTATATAGCTGCAAATTTTATGCCTAGCATATGGTATGCTCTACAATTCACAGGAGCAACTGCCACAGTTTGCATAGGCTTTGTTTTCCCGGCTGCAATATCTATAAGGGATCCTCATGGAATTGCAACAGAGAAGGATAAGATTTTATCCATTGTCATGATTGTTCTTGCTGTGTTCTCAAACAGTTTGGCCATATACAGTAATGCAGCTTCCATGTCTGGAATAACATCTTAA 1392 0.4109 MTLYEKNNEQQQQQQHTTILVNNEQTPLLLPNKISKTKTGGPYNEPPAASFTGAVFNLSTTIIGAGIMALPATMKVLGLALGVGAIAILAVLAEYSLDVLMRFSKVGNAVTYSQVMESAFGRVGRRLFQICIFVNNFGILVVYMIIIGDVLSGTSTTGIHHFGVLDGWFGEHWWTMRTFVLLMTTLFVLAPLAFFKQIDSLRYTSAIAVALALVFLVIXVGITFXKLFNGGITTPSLLPXITDMNSIWNLFTAVPILVNAFVCHSNVHTINMELQDSSRIQPVVRASLTLSSVIYILTAIFGFLLFGESTLDDVLANFDVDLGIPYSSLLNDIVRISYAFHLMLVFPVIFFSLRFNFDEFIFASSKSLNATKYKFVSTTVVLVALVYIAANFMPSIWYALQFTGATATVCIGFVFPAAISIRDPHGIATEKDKILSIVMIVLAVFSNSLAIYSNAASMSGITS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4841 463 PANTHER AMINO ACID TRANSPORTER AVT6A 12 458 - -
Amo05g4841 463 PANTHER AMINO ACID TRANSPORTER 12 458 - -
Amo05g4841 463 Pfam Transmembrane amino acid transporter protein 49 457 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4841 Amo-Chr5 123221575 123236794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4841 24 458 Amino Acid or Auxin Permease AAAP Family AT5G38820 58.581 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4841 K14207 - gmx:100778699 575.089