Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4836 ATATATGTATCATGCCATTTTGTAGCAAGTTATAAGAAAGATAACCAACAAGATACTGCTCAAAATTTCAATTATAATAAGAAAAGGTATAAGGTGCCAAAGAGCGCGTCTCCTTTGTGGAGCTTTTCAATTCACCGGGACGCTGTCATTTGTTCGATCGATGGTGACTGCGTCTTCACCCGGAGCTCACTTTTCCTTTGTGGAACTTTTCAAGTCACTGGAACGTCGCCATTACCCTTCAACGGTGACTACGCCTTCATCCGGATCCTACTTCTCCTTCGTCGAACTTTTCAAGTCATTGGGACGCTACCATTACCCTTCTACAGTGATTGTGCCTTCACCCAGATCCCATTTTGTTGCACCACTAGGCCCGTTGAAGAGAAGTGTGACGTGAGTGTTTCAAGGTGTCACGCAACCCTCTTCTCCTTAACCATCTCTGATAAGGTATATGTGTCTCCGTTGAAGTTGAGTGGACCAACCACCATTCCCGTGGAAGAGAACTGCGACGACCACATAATATCGATGGACCAATCAATTTGTGAAGAAGTATCATATGACACTGCATATGATGTGAGTGATCATTATAATTTTACCGACGTTAATGTTCTGTCGCTTAGTGAAGATGACACACAACATGTGGACAAGGGGAAAGAATTTGTAAACGTTATTCAATTAGAGGATGATGCAATGGCAGTGAATCATGAGTTACTCGATCACACTGGAATTCCAATAGAGAAAATCTCGTACAAAGTTGACTTCGTGACTAGGATTAGGAATACCAACTTTGACAAGACCAGGAAGGAATCAAAGATACCCATTAACCAATCGATACACTGTAGTCGTGAAGGTTATCGGGAGTCTCGGGTGAAGGCAGCAACTCGGGTAAAGAGAATAACAACAGCTGGATGCAAAGCAAGGATGCACACGATGCTTGATAGGCAGAAGGATAATTGGATGGTGTCCAAATTAGAATTGAAGCACACCCACCCGTGTTCTGCCAAACAACTAATTGTTCATGATGACCTTTATGACGATTGTGAATTTTGGGCTGGTATGAGAAGTACTCAACGGAGCGAGAGTATGCATGCCTTTTTCGGTGGTTACTTGCATTGCAAGAGTGGACTGGAGCAGAAGGAACTGGAGGATGATTATGCAGACTTTAAAGGAGTTTTTCCCTGTTCATCGAGCTCTACAATTGAAAGTCAATTTCAGCATGAGTACACAACCTATAAAATGGATTGTTTAGTCCGTGGTGTGACTCAAGAGGGTGATTTGTTTCGTGTGACCATGAACGATGTCGAGTTTGACCCAACGACACACAAGAGCAAGAATGTACAGCAAAAACACACTTTCATCAAGAGCAGCCACGACGAGAAGCTATCAGGCGAAAGCCACAACTTATTTAGAGGACTGTGCTCACACTTTTTTAATATTGCCCAGGATTTTGTGACATGCAAAGAAGAAGCGGCCATGTTACATTCGGGTCTTGATGAGTTACGGACAAAGCTATTTGATTATCATGCGAACCTAGGCTCTAAACGTGTTCCAACTACACAAAACAACATGGTGACACAGCGTGACCCCACTCTTGGTGCATCTGACATTCAATGTCCTTCAAAGGTTTCAACGACGGGTCGGCCGAGATTAAAGAGGCTTGGATCTGAACTGAACACCTCCATTAAGAAATTTATGCGAAGAAAGAAGAAGAATCCACCACCGCTATATGTTTAA 1731 0.431 IYVSCHFVASYKKDNQQDTAQNFNYNKKRYKVPKSASPLWSFSIHRDAVICSIDGDCVFTRSSLFLCGTFQVTGTSPLPFNGDYAFIRILLLLRRTFQVIGTLPLPFYSDCAFTQIPFCCTTRPVEEKCDVSVSRCHATLFSLTISDKVYVSPLKLSGPTTIPVEENCDDHIISMDQSICEEVSYDTAYDVSDHYNFTDVNVLSLSEDDTQHVDKGKEFVNVIQLEDDAMAVNHELLDHTGIPIEKISYKVDFVTRIRNTNFDKTRKESKIPINQSIHCSREGYRESRVKAATRVKRITTAGCKARMHTMLDRQKDNWMVSKLELKHTHPCSAKQLIVHDDLYDDCEFWAGMRSTQRSESMHAFFGGYLHCKSGLEQKELEDDYADFKGVFPCSSSSTIESQFQHEYTTYKMDCLVRGVTQEGDLFRVTMNDVEFDPTTHKSKNVQQKHTFIKSSHDEKLSGESHNLFRGLCSHFFNIAQDFVTCKEEAAMLHSGLDELRTKLFDYHANLGSKRVPTTQNNMVTQRDPTLGASDIQCPSKVSTTGRPRLKRLGSELNTSIKKFMRRKKKNPPPLYV* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4836 576 Pfam FAR1 DNA-binding domain 249 331 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4836 Amo-Chr5 123128658 123132530 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g4836 FAR1 3.8e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4836 - - adu:107470250 328.561