Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4817 ATGGAAAAGAGACAACGGAACATAGCTTTCTTTCTTTTAGCTTTCTTCTTGTGCTTCTTCATGTGGACTTCTTCAGTTACTGCTTTGCTTTCTTCTAAAGGTGTCAATTATGAAGTTGTAGCTTTGATAGACTTGAAGAGCAATCTAAAGGATCCTCGTAATGTTCTTAGTAATTGGGATGATAATGCTGTTGATCCTTGCAGTTGGGCCATGGTTTCTTGTTCTGCTGATCGTTTTGTTGTTACTCTAGCAATTCCAAGCCAAAATTTATCTGGTACACTTTCACCAAGCATAGGCAACTTAACAAACCTTCAGACTGTGCTATTGCAAGAGAATAATATAACAGGACCTATACCCTCTGAGATTGGGAGGCTACAGAAGCTTGAAACTCTTGATCTTTCTGAGAACTCTTTCATTGGTCAACTTCCAGATACTCTGTCCCATATGAATGGTCTCCATTATTTGCGGTTAAATAACAACAGTTTCTATGGAGCAATTCCTTCCTCTTTAGCTGATATGTCCCAGCTTGCCTTTCTGGACATCTCTTACAATAACTTGAGTGGACCAGTGCCTAGAATAAATGCAAAATCATTCAATATTGTAGGCAATCCTCAAATATGTAATAGCAATGGACTCGAGCAGCACTGTTTCAAAACAACACTGATTCCTTCTGCCATTAATAGTTCTCAAGATTCACAATCCTCCAATGGACCAAAGAGCCACAAAATGGCGTTGGCGGTTGCTTCAAGCCTAAGCTGCATCTGCTTACTAATTCTTGGGTTCGGATTCCTCCTTTGGTGGAGACAAAGATATAACAAGCAAATATTCTTTGATGTTAATGTTTCAGAACAACACCATGAAGAGGTTTGCCTAGGGAACCTGAAGAAATTCAATTTCAGAGAACTTCAAGTTGCAACAAACAACTTCAGCAGCAAGAACTTGGTTGGAAAAGGTGGTTTTGGAAATGTGTACAAAGGGTACCTTCCAGATGGTACAGCCATAGCAGTGAAGAGGCTCAAAGATGGTAATGCCATTGGAGGTGAGATCCAATTCCAGACAGAAGTTGAGATGATCAGCTTAGCTGTCCACCGGAATCTCCTTCGCCTTTATGGATTTTGCATGACAGCAACGGAGAGGCTCTTGGTTTACCCCTACATGTCCAACGGCAGTGTCGCCTACCGTCTTAAAGTGAAGCCAGGCCTGGATTGGGGTACAAGGAAGAGAATAGCAATAGGAGCTGCAAGAGGATTGCTATATCTGCATGAGCAGTGTGATCCAAAGATTATTCATAGGGATGTGAAAGCTGCTAACATCTTGCTGGATGATTACTGTGAGGCAGTTGTAGGAGATTTTGGACTGGCAAAGTTGTTGGATCACCGCGACTCGCACGTGACAACGGCCGTTAGAGGGACTGTAGGGCACATAGCCCCTGAGTATCTCTCAACTGGTCAGTCCTCTGAGAAAACTGATGTCTTTGGCTTTGGAATCCTTCTTCTTGAGCTCATTTCTGGCCAAAGAGCCCTTGAATTTGGCAAAGCAGCAAATCAGAAAGGAGCTATGCTTGATTGGGTGAAGAAGATCCATCTAGAGAAGAAAATAGACTTGCTAGTTGACAAGGAACTGAAGAATAACTATGACAGGATTGAGCTTGATGAGATTGTTCAAGTAGCTTTGTTATGCACTCAATACCTTCCAAGCCATAGGCCAAAGATGTCTGAGGTAGTTAGGATGCTTGAAGGAGATGGTCTTGCTGAGAAATGGGAGGCATCACAGACAGCAGAGTCGACTCGAAGCAGAGGGAATGAACTCTCTTCTTCCGAGCGATACTCCGATCTCACTGATGACTCTTCATTGCTTGCCCAAGCAATGGAACTTTCCGGACCAAGATGA 1890 0.4286 MEKRQRNIAFFLLAFFLCFFMWTSSVTALLSSKGVNYEVVALIDLKSNLKDPRNVLSNWDDNAVDPCSWAMVSCSADRFVVTLAIPSQNLSGTLSPSIGNLTNLQTVLLQENNITGPIPSEIGRLQKLETLDLSENSFIGQLPDTLSHMNGLHYLRLNNNSFYGAIPSSLADMSQLAFLDISYNNLSGPVPRINAKSFNIVGNPQICNSNGLEQHCFKTTLIPSAINSSQDSQSSNGPKSHKMALAVASSLSCICLLILGFGFLLWWRQRYNKQIFFDVNVSEQHHEEVCLGNLKKFNFRELQVATNNFSSKNLVGKGGFGNVYKGYLPDGTAIAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTATERLLVYPYMSNGSVAYRLKVKPGLDWGTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKIHLEKKIDLLVDKELKNNYDRIELDEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQTAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4817 629 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 629 - -
Amo05g4817 629 SMART serkin_6 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4817 629 Pfam Protein kinase domain 310 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4817 629 Gene3D Transferase(Phosphotransferase) domain 1 386 598 - -
Amo05g4817 629 MobiDBLite consensus disorder prediction 587 617 - -
Amo05g4817 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Amo05g4817 629 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Amo05g4817 629 Gene3D Ribonuclease Inhibitor 35 216 IPR032675 -
Amo05g4817 629 ProSiteProfiles Protein kinase domain profile. 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4817 629 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Amo05g4817 629 SUPERFAMILY Protein kinase-like (PK-like) 294 583 IPR011009 -
Amo05g4817 629 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 6 629 - -
Amo05g4817 629 Gene3D Phosphorylase Kinase; domain 1 277 385 - -
Amo05g4817 629 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Amo05g4817 629 MobiDBLite consensus disorder prediction 589 617 - -
Amo05g4817 629 SUPERFAMILY L domain-like 37 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4817 Amo-Chr5 122684687 122690982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4817 9 629 Receptor kinase-like Gene Family AT5G16000 72.814 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Amo05g4817 Pkinase 5.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4817 - - gmx:100790194 1038.48