Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4791 ATGAGGAAGGGTACTAGAAAATTAAGAAATCTACGTCTGAGCAAGATCTACACTTTCGCATGTGGTAAGAAATCATTACTGAATGAAGAACATTCTCGAATTGGAAGTCCTGGCTTTTCAAGGGTGGTTGTGTTGAATGAGGCTTCAGAGAGCTCTGAGAATGCTTCTGGGAACAACAATAACAACCAGCAGTATGCAGATAATGTTGTGAGATCCACAAAGTATACTGTTGCAAATTTCTTACCCAAGTCACTATTTGAGCAGTTTAGGAGAGTGGCAAACTTCTTTTTCTTGGTCACTGGTGTATTGTCCTTTACCAAGCTTGCGCCTTATACAGCTGTCAGTGCCATTCTGCCCTTGATTGTTGTCATTACTGCAACAATGGTCAAAGAAGGTATTGAAGATATGCGTCGCAAAAAGCAGGATATTGAGGTGAACAATAGAATAGTGGAAGTGCATAAAGGGGATGGAGTTTTTGAATGTACTGAGTGGAAGAACCTAAAGGTGGGTGACATAGTTAAGGTTGAAAAGGATGAGTTCTTCCCTGCAGACCTACTACTTCTTTCATCAAGTTATGAGGATGCAGTTTGTTATGTTGAGACCATGAACTTAGATGGAGAAACAAACTTGAAGTTGAAACAAGGCTTGGAAGTAACTTGCTCCTTAACAGAAGACAACTTGAGTGATTTCAGAGCTTCAATCAAATGTGAAGACCCCAATGCAAACTTGTATACATTTGTTGGAAGCATTGAGTTTAAGGAGCAAGTTTATGCACTTTCTCCCCAGCAGCTTCTCCTAAGAGATTCCAAACTGCGCAACACGGACTACATATTTGGAGCTGTCATCTTCACCGGTCATGACACAAAGGTTATCCAAAACTCGGTTTCTCCACCTTCCAAGAGAAGCAAGATCGAGAGGAAGATGGATCGGGTTATCTATTTCATGTTCTTAATCTTGTTCCTAATGGCACTTGTTGGATCAGTTTTCTTTGGCATTGAAACTAAACAGGACTTGAACAATAATGTGATGAAAAGATGGTATCTAAGGCCAGATGATTCTACAATTTTCTTTGATCCGAAAAGAGCACCTGCTGCTGCTTTCTTCCATTGTTTAACAGCCTTAATGTTATACAGCTTCTTTATTCCGATCTCATTGTATGTATCCATCGAAGTTGTTAAGGTCCTTCAGAGCATTTTCATAAACCAAGATATCCTAATGTATCATGAAGAAACAGACAAGCCAGCTCATGCCATTACTTCCAACTTGAATGAGGAACTTGGCCAAGTTCACACAATTCTTTCTGATAAAACTGGAACTCTCACTTGCAATTCAATGGAGTTCATCAAATGTTCTATTGCCGGAGTCGCTTATGGTCGTGGAGTCACAGAGGTGGAGAAGGCCATGAACAGAAGAAATGGATTGGAATTTGATGACTTAAGAAACTCTCCTGATAGAAAGGCACCAATCAAAGGTTTTAATTTTACAGATGAAAGGATCATGGATGGAAATTGGGTTAATGAGCCTCATGCAAATGTTATCCGGAATTTCTTTCGATTATTGGCAATTTGTCATACAGCTATACCAGAAATTAATGAAGACACAGGAAATATCTCTTATGAAGCTGAATCTCCAGATGAAGCAGCATTCGTCATTGCGGCCAAAGAACTTGGCTTTGAATTCTACAAAAGGACTCAGACTAGTTTATCAATCTTTGAGACATACATGCTTCTCCATGTTTTAGAATTCAATAGCACAAGAAAGCGAATGTCAGTCATAGTAAAAGATGAAAAGGGAAGAATTTTGCTACTTTGTAAAGGTGCTGACAGACTTGCAAACAATGGAAGAAAGTTTGAAGAGAAAATCTTGGAACATGTACATGAGTATGCCGATGCAGGTTTGAGGACATTGATACTAGCGTTCCGCGAGCTTGATGAAGAAGAATACAAGGAGTTTCAAGATAAATTTACCGAAGCAAAAAATTCAGTTTCAGCAGATCGAGAAACAATGATTGAGGAAGTATCAGATAACATCGAGAGGAATATGATTCTACTTGGTGCCACTGCAATAGAGGACAAGCTCCAACACGGGGTTCCGAATTGCATTGACAAGCTTTCTCAAGCAGGAATTAAAATCTGGGTTTTGACAGGGGATAAAATGGAGACTGCCATCAATATTGGTTTACTTAGAGAAGGAATGACGCAAATCATAATTCATTTGGATACTCCAGAAATTCGATCACTAGAGAAGGTTGGAGATAAGAGAGAAATTTTCAAGGCTTCAAGAAAAAGTATTCAGCGTCAACTATCACAAGGTGCTCAACAAATTGCAGCTGCTTGTGGAACCCCTGAGCAAGCATTTGCTCTAATTATTGATGGCAAATCACTTACTTATGCTTTAGAGGATGATATGAAGGACTTGCTTCTGGATTTAGCAACTAAATGTGCATCTGTTATTTGTTGTCGCTCATCGCCAAAACAGAAAGCATTGGTGACCAGACTTGTAAAATCTAGAACCGGTAAAACTACGTTAGCTATTGGAGATGGAGCTAATGATGTCGGGATGCTTCAAGAAGCGGACATAGGGATTGGAATCAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCCAGTGATGTTGCAATTGCACAGTTTTGTTATTTGGAACGACTACTTCTTGTGCATGGACATTGGTGTTACCGGAGAATCTCATCAATGATATGTTATTTCTTTTACAAGAATATCACATTTGGCTTCACTTTATTCTTGTTTGAGGTCCATGCGTCGTTTTCTGGAGAACCTGCATATAATGATTGGTTTTTGTCTCTCTATAATGTCTTTTTTTCGTCACTTCCAGTCATTGCCCTTGGGGTCTTTGACCAGGATGTATCAGCCCGGTTTTGTTTGAGGTTTCCTATGTTGTATCGAGAAGGTGTAGAAAACATCCTCTTTAGCTGGCGTCGAATACTTAGTTGGATGCTTAATGGATTTATTAGCTCCATAATAATTTTCTTCTTCTGCACAAAAGCTATGGAGATTCAAGCCTTTGATGAAGGAGGAAGAACTGCAGGAAGAGATATACTAGGAGCAACAATGTACACTTGTGTGGTTTGGGTAGTAAACCTGCAAATGGCACTTGCTGTAAATTACTTCACCCTGATTCAACATGTTTTAATATGGGGCTCCATTGTTATCTGGTATATCTTCCTCCTTACCTATGGAGCAATGGCCTCATCGTTTTCTGGAAACGCTTACCATGTCTTTGTTGAAACTCTGGCTCCGACTCCATGCTATTGGCTGTTGATATTTTTTGTGGTAATCACAACACTTGTACCATACTTCACTTTCTCAGCACTACAGATGCGATTCTTTCCCATGTATCATGAAATAGTGCAGTGGTTGAGGCACAAAGGAAAGACGAATGATCCCGAGTTTTGCGCTATGGTGCGGCAAAGTTCATTGAGGCCCACAACTGTTGGATCAACGGCACGCAGAGCGGCCAAGACTAACAGCCTTAGAGGCAGCTTCACTGACCATAGATGA 3537 0.4009 MRKGTRKLRNLRLSKIYTFACGKKSLLNEEHSRIGSPGFSRVVVLNEASESSENASGNNNNNQQYADNVVRSTKYTVANFLPKSLFEQFRRVANFFFLVTGVLSFTKLAPYTAVSAILPLIVVITATMVKEGIEDMRRKKQDIEVNNRIVEVHKGDGVFECTEWKNLKVGDIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTCSLTEDNLSDFRASIKCEDPNANLYTFVGSIEFKEQVYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSVSPPSKRSKIERKMDRVIYFMFLILFLMALVGSVFFGIETKQDLNNNVMKRWYLRPDDSTIFFDPKRAPAAAFFHCLTALMLYSFFIPISLYVSIEVVKVLQSIFINQDILMYHEETDKPAHAITSNLNEELGQVHTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKAMNRRNGLEFDDLRNSPDRKAPIKGFNFTDERIMDGNWVNEPHANVIRNFFRLLAICHTAIPEINEDTGNISYEAESPDEAAFVIAAKELGFEFYKRTQTSLSIFETYMLLHVLEFNSTRKRMSVIVKDEKGRILLLCKGADRLANNGRKFEEKILEHVHEYADAGLRTLILAFRELDEEEYKEFQDKFTEAKNSVSADRETMIEEVSDNIERNMILLGATAIEDKLQHGVPNCIDKLSQAGIKIWVLTGDKMETAINIGLLREGMTQIIIHLDTPEIRSLEKVGDKREIFKASRKSIQRQLSQGAQQIAAACGTPEQAFALIIDGKSLTYALEDDMKDLLLDLATKCASVICCRSSPKQKALVTRLVKSRTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDVAIAQFCYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLFEVHASFSGEPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARFCLRFPMLYREGVENILFSWRRILSWMLNGFISSIIIFFFCTKAMEIQAFDEGGRTAGRDILGATMYTCVVWVVNLQMALAVNYFTLIQHVLIWGSIVIWYIFLLTYGAMASSFSGNAYHVFVETLAPTPCYWLLIFFVVITTLVPYFTFSALQMRFFPMYHEIVQWLRHKGKTNDPEFCAMVRQSSLRPTTVGSTARRAAKTNSLRGSFTDHR* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4791 1178 PRINTS P-type cation-transporting ATPase superfamily signature 433 447 - -
Amo05g4791 1178 PRINTS P-type cation-transporting ATPase superfamily signature 845 864 - -
Amo05g4791 1178 Gene3D - 123 294 - -
Amo05g4791 1178 SFLD p-type atpase 415 896 IPR044492 -
Amo05g4791 1178 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 7 1171 - -
Amo05g4791 1178 SUPERFAMILY Calcium ATPase, transmembrane domain M 61 1123 IPR023298 -
Amo05g4791 1178 Gene3D - 685 883 IPR023214 -
Amo05g4791 1178 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 65 1130 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Amo05g4791 1178 Pfam Cation transport ATPase (P-type) 538 608 - -
Amo05g4791 1178 Gene3D - 519 684 IPR023299 GO:0000166
Amo05g4791 1178 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 688 IPR023299 GO:0000166
Amo05g4791 1178 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 1171 - -
Amo05g4791 1178 ProSitePatterns E1-E2 ATPases phosphorylation site. 435 441 IPR018303 -
Amo05g4791 1178 SUPERFAMILY Calcium ATPase, transduction domain A 153 291 IPR008250 -
Amo05g4791 1178 SUPERFAMILY HAD-like 421 889 IPR036412 -
Amo05g4791 1178 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 817 924 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo05g4791 1178 SFLD Haloacid Dehalogenase 415 896 - -
Amo05g4791 1178 Pfam Phospholipid-translocating ATPase N-terminal 59 116 IPR032631 -
Amo05g4791 1178 CDD P-type_ATPase_APLT_Dnf-like 67 994 - -
Amo05g4791 1178 Pfam Phospholipid-translocating P-type ATPase C-terminal 873 1123 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4791 Amo-Chr5 122164045 122173041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4791 11 1173 Primary Pumps ATPases AT1G68710 68.960 0.0 1734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4791 K01530 - gmx:100785037 1864.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4791 05 122164045 122173041 Amo15g1209 15 94916913 94925760 hybridization