Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4764 CCAACACAGATAGTGCCTCATGCCTATGACTCAGCATTTGCCTCTCTTCAATTCCAATATCCATGGCCTTTAGCCTTTGAAGGAAAATTGATTCCTAAGTTTGATAAGATGGACAAGGCTGCATTACTAGGGAGTATAGTAGATCATGTGAAGGATCTAAAGCGAAAAGCGATGGATGTGAGCAAAAGCATCACATGTGACCCTGATCAAGATGAAAGCTATGCTAAAGTGAAGATACTGAAGCACAACATTGTAATTTCAGTTTGCTGTGATGATAGACCAGAACTTTTTAGTGAACTCATTCAAGTCCTAAAAGGATCGAGGCTCATAAATCAAGATCAGAACATATTCAGAAGCAGCAAACAGCTAACAGAAACAGCAAAACAGAAGCAGCAAAACATACTCAAAATAAAAAGCATCAGAAAATCAGAATCCAAAATCAAGAAGGCAGCATAA 456 0.3838 PTQIVPHAYDSAFASLQFQYPWPLAFEGKLIPKFDKMDKAALLGSIVDHVKDLKRKAMDVSKSITCDPDQDESYAKVKILKHNIVISVCCDDRPELFSELIQVLKGSRLINQDQNIFRSSKQLTETAKQKQQNILKIKSIRKSESKIKKAA* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4764 151 PANTHER TRANSCRIPTION FACTOR BHLH51 29 110 - -
Amo05g4764 151 PANTHER TRANSCRIPTION FACTOR BHLH30 29 110 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4764 Amo-Chr5 121830293 121831750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4764 29 104 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 38.095 5.72e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4764 - - adu:107459448 232.646