Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4747 ATGCTTAATGAGCGTAGTGATATGTATAGCTTTGGAGTTCTTCTCATGGAGATAATTACAGGAAGATCCCCCATTGATTATTCTAGTCCTCCTAGTGAGATGAATTTGGTTGATTGGTTTAAGGGAATGGTAGCAAATCATCGTGGTGAAGAGTTAGTCCTTTAA 165 0.3818 MLNERSDMYSFGVLLMEIITGRSPIDYSSPPSEMNLVDWFKGMVANHRGEELVL* 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4747 54 PANTHER OS01G0323000 PROTEIN 1 53 - -
Amo05g4747 54 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 1 53 - -
Amo05g4747 54 SUPERFAMILY Protein kinase-like (PK-like) 2 47 IPR011009 -
Amo05g4747 54 Gene3D Transferase(Phosphotransferase) domain 1 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4747 Amo-Chr5 121523293 121523548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4747 2 46 Trihelix Transcription Factor Family AT1G68690 46.667 1.82e-11 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Amo05g4747 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4747 - - lang:109351508 100.523