Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4729 ATGGAGGTATCGGATAGCAATTTTTTTAAAACACACTCCGATGAGGAGTTTTCAAGAAGAGACGATCTAGAGTTTTTAGAGGGAGATTCGGAGATTGATAAAGATAGACCTCAAGATAAGAGAATAACAAAACTGTCACGAGAAGACATCATGCAACTTGAGTTTACAAATAAAGATGTTTATCAATTCTATAAGACTAATGCAATGATGCACGGTTTTGCTGCGAGGTTGGATGAAGTCAGACGTAATAGCGATGATTGCGTAATTATGTGCCAAATTGTTTGCAATCGGACGGGCTCAAGAAAAGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACTCCTAACTCGAAGTTGTTGCCGTGCGAGAATTTGTGCAAGACTAGGTAGAAAAATTCATAAATGGAAGGTTGTTTCGTTCAACGAAGAGCACTCTCATGAATTAGTTGATCCACTCGACGTTAACATGATGCCTGAGTATTGCACATTCAGTGTCTCAAATAAAGCTCAGGCAAAGATTTTGCACGACATAGGCATCAGG 546 0.3993 MEVSDSNFFKTHSDEEFSRRDDLEFLEGDSEIDKDRPQDKRITKLSREDIMQLEFTNKDVYQFYKTNAMMHGFAARLDEVRRNSDDCVIMCQIVCNRTGSRKEEVEKDERIRDHRLLTRSCCRARICARLGRKIHKWKVVSFNEEHSHELVDPLDVNMMPEYCTFSVSNKAQAKILHDIGIR 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4729 182 Pfam FAR1 DNA-binding domain 62 151 IPR004330 -
Amo05g4729 182 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4729 Amo-Chr5 121160425 121160970 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g4729 FAR1 2.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4729 - - ahf:112803978 375.941