Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4711 TCACGAGACCCACTGTCCCATTGTTCATTCAATTGTGTGTGTGGCGTGGCAGAGGAACTGATAGAGAACTTTCAAAGCTCTTTATCTTCTACCATCACTCAACTAGCCTCTATATCGCAGTTCCAAACTGAAAGTGTGTCTCACTCTCACAAATTTTATAAAAAGCTTTTAGTTCTATCTTGCCTTCATCTGAAAGAAAGAAAGAAAAGAGGAGTGCTGGCTGGCTTGCCCCTCATATTTATATATATTTTCTGTCTCACTCTGCGTGTCGGTACCATGAGACCAGAAGGAAATCCATTAGACCTTAACAATTTGCCTGATGACTACAATAGAGATCATGGCAAACAACTCCTCCAAGACACCTTCTCTCCCGGTTGCAGGAAAAAGAAAAGCGGCGGCGGTAAGGATGGAAAAGAGGAGTGTGGGAAGGTGTATGAGTGTAGATTTTGTTCCCTCAAGTTCTGCAAGTCCCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAAACAGAGACGCTGAATCATGCCCGTCAGCTGGTGTTTGCTGCTCATCAACCTCCACCTCACTTAGGGTATGTTTGTCATTTCCATTATTTCCTTCTTCCTCTCCTTAATTCATCTTTTGAATTCAGATGCTGTCAAGACCCAACAGCCGCAGCTCTCAGATTCCCAAGATACTTCTCTGCGTCATCCACGTCATCAACCGCTTCAGCATCTCATCATCAGCCCTATCTATACGCTTCACCATCCATGCCACCGCCGGTCTCCTTCGCTCCTCCTCCTCACGATTACTACGTGGGCCATGTCCTCAGCACCAACTATGGCGGTGCGGCAGAGTCATCAGCAGGAGCAGGAGGAGGCAGTTACACGTGCATAGGTGCACCGGTGGTGGGACAAACAGGGAAGGAGAGGGAGCAGGAAGGGTCGTTGAATTGGGGAAGATCATCATCAACATCGGGATCACAGCCTCATCATCGTTTGGATCCTCCTTCAGCGATCAATCGGTTTCAAGATGGATTCTAA 1032 0.4797 SRDPLSHCSFNCVCGVAEELIENFQSSLSSTITQLASISQFQTESVSHSHKFYKKLLVLSCLHLKERKKRGVLAGLPLIFIYIFCLTLRVGTMRPEGNPLDLNNLPDDYNRDHGKQLLQDTFSPGCRKKKSGGGKDGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFAAHQPPPHLGYVCHFHYFLLPLLNSSFEFRCCQDPTAAALRFPRYFSASSTSSTASASHHQPYLYASPSMPPPVSFAPPPHDYYVGHVLSTNYGGAAESSAGAGGGSYTCIGAPVVGQTGKEREQEGSLNWGRSSSTSGSQPHHRLDPPSAINRFQDGF* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4711 343 PANTHER ZINC FINGER PROTEIN JAGGED 93 311 IPR045320 GO:0003700
Amo05g4711 343 PANTHER ZINC FINGER PROTEIN JAGGED 93 311 IPR031113 GO:0007275
Amo05g4711 343 MobiDBLite consensus disorder prediction 307 328 - -
Amo05g4711 343 ProSiteProfiles Zinc finger C2H2 type domain profile. 145 172 IPR013087 -
Amo05g4711 343 SUPERFAMILY beta-beta-alpha zinc fingers 143 173 IPR036236 -
Amo05g4711 343 MobiDBLite consensus disorder prediction 303 343 - -
Amo05g4711 343 ProSitePatterns Zinc finger C2H2 type domain signature. 147 167 IPR013087 -
Amo05g4711 343 Gene3D Classic Zinc Finger 128 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4711 Amo-Chr5 120724712 120726062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4711 96 300 C2H2 Transcription Factor Family AT1G13400 40.090 2.45e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4711 - - aip:107616790 401.749