Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4683 ATGAGCCTGAAGAATATAGTAAGAAATGAAGGTGTTAGGGGAATGTACCGTGGGCTTTCGCCAACAATACTGGCTTTACTACCAAACTGGGCAGTTTACTTCACAGTTTATGAGCAACTAAAGGGACTGCTTCGTTCACAGGATGGTAGCAATGAACTCACAACTATTAGAAACATTATAGCTGCTGCTGGTGCTGGGGCAGCAACAGCGATTTCTACAAACCCATTGTGGGTTGTTAAGACAAGACTCCAAACACAAGGAATGAGGCCGAATGTTGTTCCTTACAAAAGTGTTCTGTCTGCTTTGACAAGGATTACCCGTGAAGAAGGCTTGCGAGGACTATATAGTGGCATTATGCCTTCATTGGCTGGTGTAAGTCATGTTGCAATTCAATTCCCAGCATATGAAAGTATCAAGTCATACATGGCAAAAAAAGATAATACAACTGTTGACAAGCTTAGTCCTGGAAGTGTTGCCATTGCATCATCAATTTCAAAAGTACTTGCCTCCGTAATGACTTATCCGCATGAGGTGATACGATCAAGGCTGCAAGAGCAAGGCCAGGCCAAAAACATGGGGGTCCATTACGAAGGGGTTATAGATTGTACTAAGAAGGTTTTCCATAAAGAAGGCATTCCGGGTTTTTATCGCGGTTGCGCAACCAATCTGTTACGAACAACTCCATCTGCTGTTATTACCTTCACCAGTTACGAGATGATACATCGGTTCTTGTTGCGGGTTATACCGGAGAACAAGGGTTATCCGCAAAGCTGTCCGAAACCCAAGGCACTTAACAAGCCCCAGGAAGAAGGAAGTAACATCATTAAGAATGACTCCTCTGATATGGGGCCATCACCATCTCCAGTCTAA 870 0.4379 MSLKNIVRNEGVRGMYRGLSPTILALLPNWAVYFTVYEQLKGLLRSQDGSNELTTIRNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPNVVPYKSVLSALTRITREEGLRGLYSGIMPSLAGVSHVAIQFPAYESIKSYMAKKDNTTVDKLSPGSVAIASSISKVLASVMTYPHEVIRSRLQEQGQAKNMGVHYEGVIDCTKKVFHKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLRVIPENKGYPQSCPKPKALNKPQEEGSNIIKNDSSDMGPSPSPV* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4683 289 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 2 252 IPR044712 GO:0006862|GO:0055085
Amo05g4683 289 Pfam Mitochondrial carrier protein 153 245 IPR018108 -
Amo05g4683 289 Pfam Mitochondrial carrier protein 52 145 IPR018108 -
Amo05g4683 289 Pfam Mitochondrial carrier protein 3 45 IPR018108 -
Amo05g4683 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 43 IPR018108 -
Amo05g4683 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 53 141 IPR018108 -
Amo05g4683 289 SUPERFAMILY Mitochondrial carrier 3 239 IPR023395 -
Amo05g4683 289 MobiDBLite consensus disorder prediction 270 289 - -
Amo05g4683 289 MobiDBLite consensus disorder prediction 253 289 - -
Amo05g4683 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 153 243 IPR018108 -
Amo05g4683 289 Gene3D Mitochondrial carrier domain 1 247 IPR023395 -
Amo05g4683 289 PANTHER BNAC06G30010D PROTEIN 2 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4683 Amo-Chr5 120205647 120210764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4683 2 249 Chloroplast and Mitochondria Gene Families AT1G25380 74.194 2.56e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4683 K15115 - gmx:100816376 463.381