Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4679 ATGACATATTCAGACACATCCACTTCCAGTTCTTCAATCTCTCTCTTTCTTCCATGCTCTCATTTTGATTCATCTCAAATGATTAAACCAACTCTCCCCTACATCCTCCTCAAGTTCTTGTTACGTTTTCCCCTTCACAATCACATCGTTATCCTCCTCTTCTTGGTCCAAATCAAAGTGACTTTCTCTGCTACAGCTCCAAACTTCACAGCTTGCGAGCCCGTGAATTGTGGTCACGGCCCAGATATAAGCTACCCTTTCTACATCACAGGGAAACAAAAACCCTTTTGTGGGTACCCAGGTTTTGAYCTCACTTGTGGCAAAAATGGCTTCCCAATTCTCGATCTCWTCAACACCCAACACATCATCCAACAAATCTTCTATAACAACAACTCACTCCGAGTCTCCAACCCCGTTTTTTCAACTCCAAACACTTCTCAGTGCATTCTTCCCACAMAGAATCTCACCGTTGGCAAGTACAGGTTTCGTATTGCTCCCAATCAGAGGAACCTCTTCGTGTTCTATGGTTGTAACTTAACGTTGCTTCCTGAAGAGATGAAAGAACATAAAATCGGGTGTTCTGTTCATAGTAATTTATCCGTTGTGGCGTTGTATGCGGAAGACGTCACGAATGTAAGAGTAGCGGAAGAGAATTGCAGAGGTGGGTGGGTGAATGCAACGGTGGAAGATGAAAAGCGAGGGAATGTTCGAGAAGCTCTTGAAGAAGGGTTTGTGATGAGTTGGAATGCAAGTAATTGCAGCACGTGCTTGAATAGTGGGGGAAGATGCGGGTTTGATACAAGGCCAGCTATATACGCTTTCAGGTGCTTCTGCCGTGATGGAGTTCATGTTGCGCAGTGTAATCTTCCGCCGCCGCCTTCGCCACCTGGACCGCAACAACCAGAGAAAAAAAGATTGAGCAAGGCTGGGAAAGTTGGCATAGCATTAGGTGTCATACTCCCAAGCATCTTAATCATTGGATTGCTCCTTCTGTTCTTCAAACGAAGACGTAGTTTCTCACGTGAATTCCAGACAAGAAACACTTATGCTGATCACTCCTCAAATCCAGACGTAGAAGGCGGAAGCGTGTACTTTGGAATTCCCCTTTTCTCCTACAAGGAGCTTGAAGAAGCAACAAGCCGCTTCGACCTTAATAAACAAGTTGGAGATGGAGGATTCGGGACCGTCTACTATGGGAAACTCCACGACGGACGAGAAGTAGCCGTGAAACGCTTATACGAGCACAACTACAGACGAGTTGAGCAGTTCATGAACGAAGTGCAGATCCTCACACGTTTGCGCCACAAGAATCTTGTGTCCCTCTATGGCTGCACATCACGCACGAGCCGCGAACTACTGCTTGTATATGAATATATTCCCAACGGAACTGTTGCTTCTCATCTTCATGGTGAATCAGCAAAGCCTGGCTTACTACCTTGGTCCACAAGAATGAAAATTGCTGTAGAAACTGCTAGTGCTTTAGCTTATCTCCATGCTACTGACATCATTCACCGCGACGTAAAAACCAACAACATTCTTCTTGATTACAGTTATTGCGTTAAAGTTGCAGACTTTGGCCTTTCAAGACTATTCCCCAATGATGTTACACATGTCTCYACGGCGCCACAAGGAACTCCGGGTTATGTTGATCCGGAGTATTACCAATGTTATCAGCTTACGAGCAAGAGTGATGTGTATAGTTTTGGAGTCGTGCTGATCGAGTTAATATCGTCTAAGCCGGCTGTTGATATGAACAGAGACAAGGATGAGATTAATTTGTCKAATCTCGCCATAAAGAAGATTCAAGAAGGTTCACTTGTTGAGCTTGTTGACCCTTGTCTGGGTTTTGATTCGGACAATGAGGTTAAGAGGATGGTTGTTTCGGTTGCGGAATTAGCTTTTCAGTGTTTGCAACRGGACAAGGAMTTGAGACCTTCAATGGAGAAAGTGTTGGARATGCTGKWGAGAATTGAGAGTGGGAAGCATGAACCAGAGCATTTAGAAGTAGTAGATGCTGGTCATGGTGTCAGTAATGTAAATTCTCAACAACCACAACCTTCAATTTCACCAGAATGGGACCAAATTGTGTTGTTGAAGAATGTGAAGCCACCTTCTTCGCCAATAACTGTTACTGATAGCTGGGAAAGTGAATCCACTACGCCTAATGTTAGTGCTTAA 2178 0.4426 MTYSDTSTSSSSISLFLPCSHFDSSQMIKPTLPYILLKFLLRFPLHNHIVILLFLVQIKVTFSATAPNFTACEPVNCGHGPDISYPFYITGKQKPFCGYPGFDLTCGKNGFPILDLXNTQHIIQQIFYNNNSLRVSNPVFSTPNTSQCILPTXNLTVGKYRFRIAPNQRNLFVFYGCNLTLLPEEMKEHKIGCSVHSNLSVVALYAEDVTNVRVAEENCRGGWVNATVEDEKRGNVREALEEGFVMSWNASNCSTCLNSGGRCGFDTRPAIYAFRCFCRDGVHVAQCNLPPPPSPPGPQQPEKKRLSKAGKVGIALGVILPSILIIGLLLLFFKRRRSFSREFQTRNTYADHSSNPDVEGGSVYFGIPLFSYKELEEATSRFDLNKQVGDGGFGTVYYGKLHDGREVAVKRLYEHNYRRVEQFMNEVQILTRLRHKNLVSLYGCTSRTSRELLLVYEYIPNGTVASHLHGESAKPGLLPWSTRMKIAVETASALAYLHATDIIHRDVKTNNILLDYSYCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLIELISSKPAVDMNRDKDEINLSNLAIKKIQEGSLVELVDPCLGFDSDNEVKRMVVSVAELAFQCLQXDKXLRPSMEKVLEMLXRIESGKHEPEHLEVVDAGHGVSNVNSQQPQPSISPEWDQIVLLKNVKPPSSPITVTDSWESESTTPNVSA* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4679 725 Gene3D Transferase(Phosphotransferase) domain 1 459 667 - -
Amo05g4679 725 Pfam Wall-associated receptor kinase C-terminal 229 281 IPR032872 -
Amo05g4679 725 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 47 716 IPR044652 -
Amo05g4679 725 MobiDBLite consensus disorder prediction 702 725 - -
Amo05g4679 725 SMART serkin_6 382 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4679 725 Pfam Protein kinase domain 384 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4679 725 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 47 716 - -
Amo05g4679 725 MobiDBLite consensus disorder prediction 704 725 - -
Amo05g4679 725 Gene3D Phosphorylase Kinase; domain 1 359 458 - -
Amo05g4679 725 ProSiteProfiles Protein kinase domain profile. 382 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4679 725 CDD STKc_IRAK 388 657 - -
Amo05g4679 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Amo05g4679 725 SUPERFAMILY Protein kinase-like (PK-like) 363 666 IPR011009 -
Amo05g4679 725 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Amo05g4679 725 Pfam Wall-associated receptor kinase galacturonan-binding 72 136 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4679 Amo-Chr5 120164697 120179580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4679 252 725 Receptor kinase-like Gene Family AT1G25390 55.579 4.35e-168 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo05g4679 Pkinase 5.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4679 - - aip:107643858 1361.28